RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 APC2O95996 2303 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 KNL1Q8NG31 2342 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 A0A087WV48 116 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 LRRC72A6NJI9 287 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 A8MX80 341 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 SUPT3HB4E1H0 165 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 CHUKO15111 745 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 YKT6O15498 198 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 FFAR2O15552 330 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 SGTAO43765 313 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PCDHGA12O60330 932 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 RNGTTO60942 597 aaKnown RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 SUPT3HO75486 399 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 RNASEH2AO75792 299 aaKnown RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 CDK14O94921 469 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 MATN4O95460 622 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ENO1P06733 434 aaKnown RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 SERPINA6P08185 405 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 HOXB3P14651 431 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 CYP2A7P20853 494 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 KELP23276 732 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 CCR7P32248 378 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ADPRHP54922 357 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ZNF33BQ06732 778 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PCDH1Q08174 1060 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 DMPKQ09013 629 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 C19orf57Q0VDD7 668 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 IFT88Q13099 833 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 SGCGQ13326 291 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 KRT72Q14CN4 511 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 COL28A1Q2UY09 1125 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 GALNTL6Q49A17 601 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ZNF658BQ4V348 819 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 C10orf62Q5T681 223 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PNCKQ6P2M8 343 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 NAPRTQ6XQN6 538 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 CYHR1Q6ZMK1 362 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ZCCHC23Q6ZST2 131 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 KLHDC8AQ8IYD2 350 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 SLC22A15Q8IZD6 547 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PNPLA1Q8N8W4 532 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 OR2T34Q8NGX1 318 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 MAGEC3Q8TD91 643 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 MCOLN3Q8TDD5 553 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ZNF483Q8TF39 744 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 TMEM159Q96B96 161 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 FOPNLQ96NB1 174 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 CAMK1GQ96NX5 476 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ZNF382Q96SR6 550 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 SLC30A3Q99726 388 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 WRAP53Q9BUR4 548 aaKnown RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 TMEM120AQ9BXJ8 343 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 MKRN2Q9H000 416 aaKnown RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 BTBD1Q9H0C5 482 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 GSTO2Q9H4Y5 243 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 WDR26Q9H7D7 661 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 KCNK13Q9HB14 408 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PARVBQ9HBI1 364 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 FSCN3Q9NQT6 498 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PHPT1Q9NRX4 125 aaPredicted RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 TXLNGQ9NUQ3 528 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 TMEM45AQ9NWC5 275 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PTBP2Q9UKA9 531 aaKnown RBP8.95□□□□□ -0.98
PTPRE-207ENST00000471218 DMTF1Q9Y222 760 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ITM2BQ9Y287 266 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PCDHGA1Q9Y5H4 931 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 PRSS21Q9Y6M0 314 aa8.95□□□□□ -0.98
PTPRE-207ENST00000471218 ADAMTS20P59510 1910 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 PCDH15Q96QU1 1955 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 A0A0G2JND7 137 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 A0A0U1RQS6 177 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 A0A1W2PP55 124 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 SLC5A10A0PJK1 596 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 NPEPPSL1A6NEC2 478 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 ANTXRLA6NF34 631 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 MGAT4DA6NG13 374 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 CDC7O00311 574 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 ZNF195O14628 629 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 HGSO14964 777 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-207ENST00000471218 RRP8O43159 456 aaKnown RBP8.94□□□□□ -0.98
PTPRE-207ENST00000471218 GPR39O43194 453 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 ITM2AO43736 263 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 MMP20O60882 483 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 KATNA1O75449 491 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 PSIP1O75475 530 aaKnown RBP8.94□□□□□ -0.98
PTPRE-207ENST00000471218 DKK1O94907 266 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 PCDH8O95206 1070 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 ESRRBO95718 433 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 CHEK2O96017 543 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 OTCP00480 354 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 CATP04040 527 aaKnown RBP8.94□□□□□ -0.98
PTPRE-207ENST00000471218 RPN2P04844 631 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 F7P08709 466 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-207ENST00000471218 ANXA5P08758 320 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 HIST1H2AGP0C0S8 130 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-207ENST00000471218 MYCLP1P12525 358 aaPredicted RBP8.94□□□□□ -0.98
PTPRE-207ENST00000471218 HIST1H2ADP20671 130 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 MAOBP27338 520 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 HSD17B2P37059 387 aa8.94□□□□□ -0.98
PTPRE-207ENST00000471218 CCT8P50990 548 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms