RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, human

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSB-209	ENST00000470621	hCG_1809904	A0A1W2PP81	198 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621		A0A1W2PPE2	198 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621		A0A1W2PR64	198 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	NTN3	O00634	580 aa	Predicted RBP	4.89	□□□□□ -1.63
SSB-209	ENST00000470621	MEIS2	O14770	477 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	ATP6V0E1	O15342	81 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	IGHV4-59	P01825	116 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	NR2F1	P10589	423 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	AKR1B1	P15121	316 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	WNT5A	P41221	380 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	PDX1	P52945	283 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	IL11RA	Q14626	422 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	TOMM20	Q15388	145 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	KRTAP27-1	Q3LI81	207 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	CBWD6	Q4V339	395 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	CBWD3	Q5JTY5	395 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	SPDYC	Q5MJ68	293 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	CYP4A22	Q5TCH4	519 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	PCGF5	Q86SE9	256 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	TMPRSS11B	Q86T26	416 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	TMEM139	Q8IV31	216 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	WDSUB1	Q8N9V3	476 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	NPEPL1	Q8NDH3	523 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	OR11H4	Q8NGC9	324 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	SPACA9	Q96E40	222 aa	Predicted RBP	4.89	□□□□□ -1.63
SSB-209	ENST00000470621	NSL1	Q96IY1	281 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	ZNF830	Q96NB3	372 aa	Predicted RBP	4.89	□□□□□ -1.63
SSB-209	ENST00000470621	FNBP1	Q96RU3	617 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	APOL6	Q9BWW8	343 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	BARHL1	Q9BZE3	327 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.89	□□□□□ -1.63
SSB-209	ENST00000470621	INTS10	Q9NVR2	710 aa	Known RBP	4.89	□□□□□ -1.63
SSB-209	ENST00000470621	HAO2	Q9NYQ3	351 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	LRWD1	Q9UFC0	647 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	DAPK2	Q9UIK4	370 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	PPIE	Q9UNP9	301 aa	Known RBP	4.89	□□□□□ -1.63
SSB-209	ENST00000470621	PCDH11Y	Q9BZA8	1340 aa		4.89	□□□□□ -1.63
SSB-209	ENST00000470621	KAT6B	Q8WYB5	2073 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621		A0A1W2PPM1	405 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	NR5A2	O00482	541 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	PIGN	O95427	931 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	LDHC	P07864	332 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	PLA2G4B	P0C869	781 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	EFNA1	P20827	205 aa	Predicted RBP	4.88	□□□□□ -1.63
SSB-209	ENST00000470621	LIG4	P49917	911 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	SP3	Q02447	781 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	ZNF415	Q09FC8	603 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	UGP2	Q16851	508 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	KLHL26	Q53HC5	615 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	SYT2	Q8N9I0	419 aa	Predicted RBP	4.88	□□□□□ -1.63
SSB-209	ENST00000470621	ADAD2	Q8NCV1	583 aa	Known RBP	4.88	□□□□□ -1.63
SSB-209	ENST00000470621	OR2T11	Q8NH01	316 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	EXD1	Q8NHP7	514 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	OPA3	Q9H6K4	179 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	OLAH	Q9NV23	265 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.88	□□□□□ -1.63
SSB-209	ENST00000470621	C2orf42	Q9NWW7	574 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	TMEM181	Q9P2C4	612 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	ZDHHC2	Q9UIJ5	367 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.88	□□□□□ -1.63
SSB-209	ENST00000470621	TRPV2	Q9Y5S1	764 aa		4.88	□□□□□ -1.63
SSB-209	ENST00000470621		A0A1W2PN81	502 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	SPRY1	O43609	319 aa	Predicted RBP	4.87	□□□□□ -1.63
SSB-209	ENST00000470621	TSPAN1	O60635	241 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	ADRB2	P07550	413 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	ABCB1	P08183	1280 aa	Predicted RBP	4.87	□□□□□ -1.63
SSB-209	ENST00000470621	DANCR	P0C864	163 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	SMIM18	P0DKX4	95 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	HSPA8	P11142	646 aa	Known RBP	4.87	□□□□□ -1.63
SSB-209	ENST00000470621	MPZ	P25189	248 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	CHRNA7	P36544	502 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	ITPRIPL2	Q3MIP1	535 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	C6orf163	Q5TEZ5	329 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	KRTAP7-1	Q8IUC3	87 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	PPFIBP2	Q8ND30	876 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	ZNF248	Q8NDW4	579 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	TEKT4	Q8WW24	435 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	NUP85	Q9BW27	656 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	CCDC106	Q9BWC9	280 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	SERINC1	Q9NRX5	453 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	INTS9	Q9NV88	658 aa	Known RBP	4.87	□□□□□ -1.63
SSB-209	ENST00000470621	CACNG5	Q9UF02	275 aa		4.87	□□□□□ -1.63
SSB-209	ENST00000470621	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	ZNF821	O75541	412 aa	Predicted RBP	4.86	□□□□□ -1.63
SSB-209	ENST00000470621	PSMD10	O75832	226 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	CGA	P01215	116 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	ZNF26	P17031	533 aa	Predicted RBP	4.86	□□□□□ -1.63
SSB-209	ENST00000470621	JAK1	P23458	1154 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	SLC6A6	P31641	620 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	SLC9A3	P48764	834 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	TMEM187	Q14656	261 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	ELFN2	Q5R3F8	820 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	CFAP58	Q5T655	872 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	BHLHB9	Q6PI77	547 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	PLPPR4	Q7Z2D5	763 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	CAMKMT	Q7Z624	323 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	PIGZ	Q86VD9	579 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	AVL9	Q8NBF6	648 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	OR4C3	Q8NH37	302 aa		4.86	□□□□□ -1.63
SSB-209	ENST00000470621	GIMAP5	Q96F15	307 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms