RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ABRAXAS1Q6UWZ7 409 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 TPGS1Q6ZTW0 290 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 LRRC70Q7Z2Q7 622 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ANKRD33Q7Z3H0 272 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CARM1Q86X55 608 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 NXPE1Q8N323 547 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CBR4Q8N4T8 237 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 DHRSXQ8N5I4 330 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ARL14EPQ8N8R7 260 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 PNPLA1Q8N8W4 532 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SNX31Q8N9S9 440 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 TTC16Q8NEE8 873 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 FIBINQ8TAL6 211 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ITFG1Q8TB96 612 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 GRIN3AQ8TCU5 1115 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 PIH1D2Q8WWB5 315 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 VPS33AQ96AX1 596 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 PLEKHG4BQ96PX9 1271 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ACOX2Q99424 681 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 COPS8Q99627 209 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 YTHDF1Q9BYJ9 559 aaKnown RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 SLC2A11Q9BYW1 496 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CD244Q9BZW8 370 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CAAP1Q9H8G2 361 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 ABCB8Q9NUT2 735 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 CMTM6Q9NX76 183 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SMPD3Q9NY59 655 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 CFAP97Q9P2B7 532 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 GALPQ9UBC7 116 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 KLQ9UEF7 1012 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 GIMAP2Q9UG22 337 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 EGFL7Q9UHF1 273 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 EVLQ9UI08 416 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 IKZF3Q9UKT9 509 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 SNX6Q9UNH7 406 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 POLR3HQ9Y535 204 aaPredicted RBP7.84□□□□□ -1.15
SMC4-212ENST00000470240 OR51B4Q9Y5P0 310 aa7.84□□□□□ -1.15
SMC4-212ENST00000470240 TRBV5-4A0A0C4DH59 114 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 H3BNH8 94 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 LSM1O15116 133 aaKnown RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 SLC16A5O15375 505 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 CLOCKO15516 846 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 TPST1O60507 370 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 STK16O75716 305 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 BMP10O95393 424 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 OLFM2O95897 454 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 EFEMP2O95967 443 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 ALPIP09923 528 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 CYP2A6P11509 494 aaPredicted RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 ARSAP15289 507 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 ZNF23P17027 643 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 ITGB6P18564 788 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 CYP2A7P20853 494 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 MYF6P23409 242 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 GABRR2P28476 465 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 CAPGP40121 348 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 GNPDA1P46926 289 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 HNMTP50135 292 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 TPD52P55327 224 aaPredicted RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 RPL38P63173 70 aaKnown RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 SLC7A9P82251 487 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 CDKL1Q00532 357 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 ECT2LQ008S8 904 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 CREB5Q02930 508 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 MERTKQ12866 999 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 LSAMPQ13449 338 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 DMC1Q14565 340 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 GPNMBQ14956 572 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 CHRNA6Q15825 494 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 PLEKHG6Q3KR16 790 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 NADK2Q4G0N4 442 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 ARHGAP15Q53QZ3 475 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 FBXO48Q5FWF7 155 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 PITRM1Q5JRX3 1037 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 COX20Q5RI15 118 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 THEMIS2Q5TEJ8 643 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 TXNDC8Q6A555 127 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 GLYATQ6IB77 296 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 HMBOX1Q6NT76 420 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 LETMD1Q6P1Q0 360 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 SCIMPQ6UWF3 145 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 SBSNQ6UWP8 590 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 RBM44Q6ZP01 1051 aaKnown RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 TPRG1Q6ZUI0 275 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 HTR3DQ70Z44 454 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 GPR141Q7Z602 305 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 ADGRG5Q8IZF4 528 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 TMEM132CQ8N3T6 1108 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 SFRP1Q8N474 314 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 FIBCD1Q8N539 461 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 FAM47BQ8NA70 645 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 PAPD5Q8NDF8 572 aaKnown RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 PHC3Q8NDX5 983 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 SH3RF2Q8TEC5 729 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 DIS3LQ8TF46 1054 aaKnown RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 SKA2Q8WVK7 121 aaPredicted RBP7.83□□□□□ -1.16
SMC4-212ENST00000470240 CYGBQ8WWM9 190 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 SLC13A3Q8WWT9 602 aa7.83□□□□□ -1.16
SMC4-212ENST00000470240 STARD8Q92502 1023 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms