RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 APPL2Q8NEU8 664 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 PTPMT1Q8WUK0 201 aaPredicted RBP3.56□□□□□ -1.84
BRCA2-202ENST00000470094 HSD17B8Q92506 261 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 CNDP2Q96KP4 475 aaKnown RBP3.56□□□□□ -1.84
BRCA2-202ENST00000470094 LMF2Q9BU23 707 aaKnown RBP3.56□□□□□ -1.84
BRCA2-202ENST00000470094 VN1R1Q9GZP7 353 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 MRPL15Q9P015 296 aaKnown RBP3.56□□□□□ -1.84
BRCA2-202ENST00000470094 MAGED1Q9Y5V3 778 aaPredicted RBP3.56□□□□□ -1.84
BRCA2-202ENST00000470094 FAM169AQ9Y6X4 670 aa3.56□□□□□ -1.84
BRCA2-202ENST00000470094 SOS1Q07889 1333 aaPredicted RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 LOC102723996A0A087X1L8 192 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GPR75-ASB3A0A0A6YYF3 556 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 IGHV4-61A0A0C4DH41 118 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 A0A1W2PN81 502 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GLOD5A6NK44 160 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 TSPY2A6NKD2 308 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 A8MV72 311 aaPredicted RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 H7C0S8 307 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GAPDHSO14556 408 aaPredicted RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 ATP6V0E1O15342 81 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 PRKRAO75569 313 aaKnown RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 TRMUO75648 421 aaKnown RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 PIGNO95427 931 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 BCL10O95999 233 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 NGFP01138 241 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 IGHV4-59P01825 116 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 TPOP07202 933 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 HMBSP08397 361 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 TSPY3P0CV98 308 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 TSPY8P0CW00 308 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 CEACAM1P13688 526 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 SLC6A6P31641 620 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 COPB2P35606 906 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 CHRNA7P36544 502 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 TSPY1Q01534 308 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 PRKCZQ05513 592 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GPR17Q13304 367 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GRAPQ13588 217 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 BMP2KLQ5H9B9 411 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 DCAF10Q5QP82 559 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 C1QTNF12Q5T7M4 302 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 SLC16A9Q7RTY1 509 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 ADGRA1Q86SQ6 560 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 TMEM173Q86WV6 379 aaPredicted RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 COMMD2Q86X83 199 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 LINC00346Q8IVM7 164 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GUF1Q8N442 669 aaKnown RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 ZNF843Q8N446 348 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 KCTD6Q8NC69 237 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 DDHD1Q8NEL9 900 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 OR5M8Q8NGP6 311 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 PRPF31Q8WWY3 499 aaKnown RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 LPGAT1Q92604 370 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 GIMAP5Q96F15 307 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 MRPL1Q9BYD6 325 aaKnown RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 FLRT3Q9NZU0 649 aa3.55□□□□□ -1.84
BRCA2-202ENST00000470094 WBP11Q9Y2W2 641 aaKnown RBP3.55□□□□□ -1.84
BRCA2-202ENST00000470094 LOC101059948A0A1B0GTJ6 334 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ANKUB1A6NFN9 424 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 NR5A2O00482 541 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ZNF197O14709 1029 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 IPO8O15397 1037 aaKnown RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 NADKO95544 446 aaPredicted RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 APOA4P06727 396 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 FRMD6-AS1P0C7T7 363 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 FAM157CP0CG43 387 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 EFNA1P20827 205 aaPredicted RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 WNT5AP41221 380 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 TPD52P55327 224 aaPredicted RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 DMPKQ09013 629 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 RRS1Q15050 365 aaKnown RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 FCN2Q15485 313 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ZFP69Q49AA0 526 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 GARNL3Q5VVW2 1013 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 TMEM211Q6ICI0 200 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 FBXL22Q6P050 247 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 TEX38Q6PEX7 206 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 TMPRSS11FQ6ZWK6 438 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 CFAP206Q8IYR0 622 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 MINDY1Q8N5J2 469 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 TRIML1Q8N9V2 468 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 GRHL3Q8TE85 626 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ZNF622Q969S3 477 aaKnown RBP eCLIP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ART5Q96L15 291 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 MS4A10Q96PG2 267 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 BTBD10Q9BSF8 475 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 FGF22Q9HCT0 170 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ZCCHC17Q9NP64 241 aaKnown RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ZDHHC2Q9UIJ5 367 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 ZHX1Q9UKY1 873 aaPredicted RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 MRPS28Q9Y2Q9 187 aaKnown RBP3.54□□□□□ -1.84
BRCA2-202ENST00000470094 NME7Q9Y5B8 376 aa3.54□□□□□ -1.84
BRCA2-202ENST00000470094 SLCO1B7G3V0H7 640 aa3.53□□□□□ -1.84
BRCA2-202ENST00000470094 RNASEH1O60930 286 aaKnown RBP3.53□□□□□ -1.84
BRCA2-202ENST00000470094 ZNF883P0CG24 379 aa3.53□□□□□ -1.84
BRCA2-202ENST00000470094 ZNF26P17031 533 aaPredicted RBP3.53□□□□□ -1.84
BRCA2-202ENST00000470094 CA4P22748 312 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms