RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 UBFD1O14562 309 aaKnown RBP12.5□□□□□ -0.41
RUNX1-213ENST00000469087 BCAT2O15382 392 aaPredicted RBP12.5□□□□□ -0.41
RUNX1-213ENST00000469087 HSPA4LO95757 839 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 RPS17P08708 135 aaKnown RBP12.5□□□□□ -0.41
RUNX1-213ENST00000469087 SLC35G4P0C7Q5 338 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 GGT5P36269 586 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 ACTR1BP42025 376 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 HSPA7P48741 367 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
RUNX1-213ENST00000469087 ACTR1AP61163 376 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 GRB7Q14451 532 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 PCBP2Q15366 365 aaKnown RBP eCLIP12.5□□□□□ -0.413e-12■■■■□ 23.1
RUNX1-213ENST00000469087 UAP1L1Q3KQV9 507 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 PLK5Q496M5 336 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 SLC30A9Q6PML9 568 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 ABRAXAS1Q6UWZ7 409 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 UNC5DQ6UXZ4 953 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 GPBAR1Q8TDU6 330 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 PPP4R1Q8TF05 950 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 CCDC138Q96M89 665 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 C12orf66Q96MD2 445 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 ELAC2Q9BQ52 826 aaKnown RBP12.5□□□□□ -0.41
RUNX1-213ENST00000469087 CD244Q9BZW8 370 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 TMEM74BQ9NUR3 256 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 PNPOQ9NVS9 261 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 ZDHHC2Q9UIJ5 367 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
RUNX1-213ENST00000469087 FANCMQ8IYD8 2048 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 A0A1B0GTL3 188 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 OR52A4PA6NMU1 304 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 VILLO15195 856 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 RRP9O43818 475 aaKnown RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 SLC16A8O95907 504 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 CSF2P04141 144 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 CELA2BP08218 269 aaPredicted RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 KITP10721 976 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 SERPINB5P36952 375 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 NXPH1P58417 271 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 CLCQ05315 142 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 PRKG2Q13237 762 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 PRAMEF14Q5SWL7 426 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 LYSMD4Q5XG99 296 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 DUS1LQ6P1R4 473 aaKnown RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 CRLF3Q8IUI8 442 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 PHACTR4Q8IZ21 702 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 ZNF781Q8N8C0 355 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 OR5K2Q8NHB8 316 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 ZNF483Q8TF39 744 aaPredicted RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 PYCR2Q96C36 320 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 ATG10Q9H0Y0 220 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 TNFRSF12AQ9NP84 129 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 SEMA4BQ9NPR2 832 aaPredicted RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 DNAJC28Q9NX36 388 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 WWOXQ9NZC7 414 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 MARCOQ9UEW3 520 aaPredicted RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 PCOLCE2Q9UKZ9 415 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 TNPO3Q9Y5L0 923 aaKnown RBP12.49□□□□□ -0.41
RUNX1-213ENST00000469087 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
RUNX1-213ENST00000469087 PRAMEF33A0A0G2JMD5 474 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 PABPN1LA6NDY0 278 aaKnown RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 PDZK1P1A8MUH7 402 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 MYO1CO00159 1063 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 CCNT2O60583 730 aaKnown RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 STK16O75716 305 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 SP9P0CG40 484 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 JUNDP17535 347 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 MPSTP25325 297 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 HNMTP50135 292 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 BLKP51451 505 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 AFF3P51826 1226 aaKnown RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 SH3BP2P78314 561 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 GALNT1Q10472 559 aaPredicted RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 ILF3Q12906 894 aaKnown RBP eCLIP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 C1orf61Q13536 156 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 PTCHD3Q3KNS1 767 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 WASH2PQ6VEQ5 465 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 C11orf74Q86VG3 221 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 LMNTD1Q8N9Z9 388 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 OR9A1PQ8NGU1 263 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 PIWIL2Q8TC59 973 aaKnown RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 AGR3Q8TD06 166 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 TRPC4APQ8TEL6 797 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 ZNF473Q8WTR7 871 aaKnown RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 UBTD2Q8WUN7 234 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 FBXL8Q96CD0 374 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 FERD3LQ96RJ6 166 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 NRTNQ99748 197 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 TRMOQ9BU70 441 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 ILKAPQ9H0C8 392 aaPredicted RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 WASH6PQ9NQA3 447 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 STOX2Q9P2F5 926 aaPredicted RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 RAP2CQ9Y3L5 183 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 ATXN2Q99700 1313 aaKnown RBP12.48□□□□□ -0.41
RUNX1-213ENST00000469087 SPAG17Q6Q759 2223 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 TRBV23OR9-2A0A075B6M9 112 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 A6NCN8 305 aa12.48□□□□□ -0.41
RUNX1-213ENST00000469087 NDUFAB1O14561 156 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms