RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 DARS2Q6PI48 645 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 SCARA5Q6ZMJ2 495 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 GK5Q6ZS86 529 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 CDHR3Q6ZTQ4 885 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 GPRIN3Q6ZVF9 776 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 USP50Q70EL3 339 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 MON1BQ7L1V2 547 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 STRADAQ7RTN6 431 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF720Q7Z2F6 126 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 EFL1Q7Z2Z2 1120 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 C16orf62Q7Z3J2 963 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 PIWIL4Q7Z3Z4 852 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 MAVSQ7Z434 540 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 R3HCC1LQ7Z5L2 792 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 SYVN1Q86TM6 617 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 STK32CQ86UX6 486 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ZSWIM9Q86XI8 627 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 GATAD2AQ86YP4 633 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 P3H2Q8IVL5 708 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 C10orf107Q8IVU9 208 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 NKAIN4Q8IVV8 208 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 RNF113BQ8IZP6 322 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 RDH10Q8IZV5 341 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 NKAPQ8N5F7 415 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 PARP16Q8N5Y8 322 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 MYCT1Q8N699 235 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 C2orf69Q8N8R5 385 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 CDYL2Q8N8U2 506 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 Q8N9G6 341 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 CAMKVQ8NCB2 501 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 TMEM35BQ8NCS4 154 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 OR52E4Q8NGH9 312 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 OR8K3Q8NH51 312 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 UTP15Q8TED0 518 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 GANCQ8TET4 914 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 SLC20A1Q8WUM9 679 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 CANT1Q8WVQ1 401 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ASB11Q8WXH4 323 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 DDX1Q92499 740 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 AKAP1Q92667 903 aaKnown RBP eCLIP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 KAT5Q92993 513 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 YIPF5Q969M3 257 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 HDAC10Q969S8 669 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ZC3HAV1LQ96H79 300 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 VPS39Q96JC1 886 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 HSPA12BQ96MM6 686 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF778Q96MU6 729 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 WDFY2Q96P53 400 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 RBM14Q96PK6 669 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ACCSQ96QU6 501 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 DCLRE1CQ96SD1 692 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 CPNE1Q99829 537 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 SLC30A2Q9BRI3 323 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 REEP2Q9BRK0 252 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 LXNQ9BS40 222 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 TRMOQ9BU70 441 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 MLPHQ9BV36 600 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 TTLL2Q9BWV7 592 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 BTBD2Q9BX70 525 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 HEMGNQ9BXL5 484 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 UCK2Q9BZX2 261 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 LHX5Q9H2C1 402 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 NT5DC2Q9H857 520 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 PLEKHA5Q9HAU0 1116 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 SP110Q9HB58 689 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 FOLH1BQ9HBA9 442 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ATP13A1Q9HD20 1204 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 XPNPEP1Q9NQW7 623 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 EIF2B3Q9NR50 452 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 TBC1D22BQ9NU19 505 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 IMP3Q9NV31 184 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 KLHL11Q9NVR0 708 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 PNPOQ9NVS9 261 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 MCUBQ9NWR8 336 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 UCKL1Q9NWZ5 548 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 LYARQ9NX58 379 aaKnown RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 KCTD5Q9NXV2 234 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 CACNA2D2Q9NY47 1150 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 IL37Q9NZH6 218 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 TMEM216Q9P0N5 145 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 EXTL2Q9UBQ6 330 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 DNAJB9Q9UBS3 223 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 EPHA6Q9UF33 1036 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 UBQLN2Q9UHD9 624 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 MAGEL2Q9UJ55 1249 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 ELF5Q9UKW6 265 aaPredicted RBP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 OAZ3Q9UMX2 235 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 BAIAP2Q9UQB8 552 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 JAG2Q9Y219 1238 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 NIP7Q9Y221 180 aaKnown RBP eCLIP4.77□□□□□ -1.65
SF3B1-207ENST00000468925 KLK4Q9Y5K2 254 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 SNX8Q9Y5X2 465 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 LAMB2P55268 1798 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 MAST2Q6P0Q8 1798 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 TMEM2Q9UHN6 1383 aa4.77□□□□□ -1.65
SF3B1-207ENST00000468925 A0A0G2JMP0 313 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 CCDC195A0A1B0GUA6 201 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 ABHD14A-ACY1A0A1B0GW23 586 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 A0A1W2PQH9 124 aa4.76□□□□□ -1.65
SF3B1-207ENST00000468925 A0A1W2PRQ8 180 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms