RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MLLT10P55197 1068 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 POLR2LP62875 67 aaKnown RBP4.79□□□□□ -1.64
LSM5-209ENST00000468872 MZT1Q08AG7 82 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 LINGO4Q6UY18 593 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 LONP2Q86WA8 852 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 ARHGAP24Q8N264 748 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 CPSF7Q8N684 471 aaKnown RBP4.79□□□□□ -1.64
LSM5-209ENST00000468872 DEPDC1BQ8WUY9 529 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 EXT2Q93063 718 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 OTUB1Q96FW1 271 aaPredicted RBP4.79□□□□□ -1.64
LSM5-209ENST00000468872 ABHD8Q96I13 439 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 IL17FQ96PD4 163 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 POLR3CQ9BUI4 534 aaPredicted RBP4.79□□□□□ -1.64
LSM5-209ENST00000468872 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 ABCC10Q5T3U5 1492 aa4.79□□□□□ -1.64
LSM5-209ENST00000468872 TRAV34A0A0B4J273 112 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 SMTNL1A8MU46 457 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 PRAC2D3DTV9 90 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 WDPCPO95876 746 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 CD22P20273 847 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 THOP1P52888 689 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 KRT83P78385 493 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 PRKCZQ05513 592 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 MBTD1Q05BQ5 628 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 MFAP5Q13361 173 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 DUOXA1Q1HG43 343 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 MDH1BQ5I0G3 518 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 MPP7Q5T2T1 576 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 DSG4Q86SJ6 1040 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 SLC9B2Q86UD5 537 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 SETD6Q8TBK2 473 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 RNF128Q8TEB7 428 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 FEVQ99581 238 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 CPNE1Q99829 537 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 VN1R1Q9GZP7 353 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 STK26Q9P289 416 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 GTF3C4Q9UKN8 822 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 ICAM5Q9UMF0 924 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 POMT1Q9Y6A1 747 aa4.78□□□□□ -1.64
LSM5-209ENST00000468872 CLASP1Q7Z460 1538 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 A0A087WYN8 130 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 PLSCR5A0PG75 271 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 ARHGEF37A1IGU5 675 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 ANXA2P2A6NMY6 339 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 H0Y626 953 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 CLDN4O14493 209 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 SYNCRIPO60506 623 aaKnown RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 ZNF432O94892 652 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 BAG4O95429 457 aaKnown RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 ACSL3O95573 720 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 IGKV3-20P01619 116 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 EEF1B2P24534 225 aaKnown RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 PTPN3P26045 913 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 HOXC13P31276 330 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 IL15P40933 162 aaPredicted RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 PRKCIP41743 596 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 ASCL1P50553 236 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 ZNF132P52740 706 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 MAPK12P53778 367 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 SIRPB2Q5JXA9 342 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 MFSD12Q6NUT3 480 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 SPSB3Q6PJ21 355 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 PET117Q6UWS5 81 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 KCTD8Q6ZWB6 473 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 COMMD2Q86X83 199 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 TRIML1Q8N9V2 468 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 FGFBP3Q8TAT2 258 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 SPATA20Q8TB22 786 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 SECTM1Q8WVN6 248 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 SYN2Q92777 582 aaPredicted RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 FAM162AQ96A26 154 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 IGSF21Q96ID5 467 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 RMDN2Q96LZ7 410 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 C17orf77Q96MU5 243 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 JAKMIP1Q96N16 626 aaKnown RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 DUX5Q96PT3 197 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 CITED2Q99967 270 aaPredicted RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 THUMPD3Q9BV44 507 aaKnown RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 ARRDC1-AS1Q9H2J1 176 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 FKRPQ9H9S5 495 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 B3GAT1Q9P2W7 334 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 LRWD1Q9UFC0 647 aa4.77□□□□□ -1.65
LSM5-209ENST00000468872 CPSF3Q9UKF6 684 aaKnown RBP4.77□□□□□ -1.65
LSM5-209ENST00000468872 PTPRMP28827 1452 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 A0A087WV48 116 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 OR6C76A6NM76 312 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 PRR32B1ATL7 298 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 SYNGR3O43761 229 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 CTSVO60911 334 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 IGHV2-70P01814 119 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 IGHV4-39P01824 125 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 PDGFRAP16234 1089 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 MUTP22033 750 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 CDC25CP30307 473 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 LHX1P48742 406 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 CAPZA1P52907 286 aa4.76□□□□□ -1.65
LSM5-209ENST00000468872 MAT1AQ00266 395 aaKnown RBP4.76□□□□□ -1.65
LSM5-209ENST00000468872 EEF1A2Q05639 463 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms