RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 IGLV3-27P01718 113 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 MT-ND1P03886 318 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 S100BP04271 92 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 SLC35G4P0C7Q5 338 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CCNCP24863 283 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PSME3P61289 254 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 MESP2Q0VG99 397 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 GK5Q6ZS86 529 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PARS2Q7L3T8 475 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 LINC00523Q86TU6 105 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 DHFR2Q86XF0 187 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 OR13H1Q8NG92 308 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 MAGEE2Q8TD90 523 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 NCSTNQ92542 709 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TMEM74Q96NL1 305 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 DGCR6LQ9BY27 220 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 HDAC8Q9BY41 377 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 EML4Q9HC35 981 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PALMDQ9NP74 551 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 SYBUQ9NX95 663 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 C6orf203Q9P0P8 240 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ITM2BQ9Y287 266 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 A0A0A0MRY4 1105 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 A8MU76 341 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 BHMG1C9JSJ3 638 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 FAM72CH0Y354 149 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 AP3B1O00203 1094 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 MATN3O15232 486 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 SOCS5O75159 536 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 VAPBO95292 243 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 BCL10O95999 233 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TSHRP16473 764 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 STMN1P16949 149 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 XRCC1P18887 633 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CRHR1P34998 444 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CCNG1P51959 295 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 RAP1GDS1P52306 607 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 LSM3P62310 102 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 DMPKQ09013 629 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 C3orf38Q5JPI3 329 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 FAM72AQ5TYM5 149 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ZDHHC20Q5W0Z9 365 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 FAM72DQ6L9T8 149 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 Q6ZVL8 140 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 KCNMB4Q86W47 210 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 FAM72BQ86X60 149 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PDSS2Q86YH6 399 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PLD5Q8N7P1 536 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 KCTD4Q8WVF5 259 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ARRDC3Q96B67 414 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PCDHAC1Q9H158 963 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TMEM245Q9H330 911 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 FANCEQ9HB96 536 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 SSU72Q9NP77 194 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TMEM74BQ9NUR3 256 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 OR1A2Q9Y585 309 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 LINC00854A0A1B0GVQ3 168 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TRPC5OSA6NMA1 111 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TRAFD1O14545 582 aaPredicted RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 BIRC5O15392 142 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PLIN3O60664 434 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 LILRB5O75023 590 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CHEK2O96017 543 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TFPTP0C1Z6 253 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ACP5P13686 325 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ZNF30P17039 623 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PGAM1P18669 254 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 SPINK2P20155 84 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ITGAXP20702 1163 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PTPN7P35236 360 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 HADHAP40939 763 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 TRPC1P48995 793 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 SRP54P61011 504 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 DSC2Q02487 901 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 GALNT3Q14435 633 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 NOMO1Q15155 1222 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CARTPTQ16568 116 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CA9Q16790 459 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CCDC153Q494R4 210 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 SLC9B1Q4ZJI4 515 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CXorf57Q6NSI4 855 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PAOXQ6QHF9 649 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 IQCHQ86VS3 1027 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 GPR135Q8IZ08 494 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 FBXO39Q8N4B4 442 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 DENND6BQ8NEG7 585 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PPHLN1Q8NEY8 458 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 OR56A4Q8NGH8 313 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 LRTOMTQ8WZ04 291 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ITFG2Q969R8 447 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 CERS2Q96G23 380 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PSKH2Q96QS6 385 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 APOOQ9BUR5 198 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 ASB8Q9H765 288 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 BPIFA1Q9NP55 256 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 IMP3Q9NV31 184 aaKnown RBP5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PTTG2Q9NZH5 202 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 COPG2Q9UBF2 871 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 PISDQ9UG56 409 aa5.88□□□□□ -1.47
SHQ1-205ENST00000468371 STOML2Q9UJZ1 356 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms