RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 BADQ92934 168 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 MYDGFQ969H8 173 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 NSMCE3Q96MG7 304 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 ZBTB26Q9HCK0 441 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 TRPS1Q9UHF7 1281 aa13.52□□□□□ -0.25
BRAT1-203ENST00000467558 KIAA0100Q14667 2235 aaKnown RBP13.52□□□□□ -0.25
BRAT1-203ENST00000467558 AQP12BA6NM10 295 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 LIN7AO14910 233 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ARHGEF9O43307 516 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 MMP20O60882 483 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ITGBL1O95965 494 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 EBLN1P0CF75 366 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ITGAXP20702 1163 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 CD68P34810 354 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 STK19P49842 368 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 CYP4F3Q08477 520 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 PTCHD3Q3KNS1 767 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 TECRLQ5HYJ1 363 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ZNF776Q68DI1 518 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 GALNT18Q6P9A2 607 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 B3GNT6Q6ZMB0 384 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ARMC8Q8IUR7 673 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 AQP12AQ8IXF9 295 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 MIEF2Q96C03 454 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 SLC38A2Q96QD8 506 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 RBM4BQ9BQ04 359 aaKnown RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 RBM4Q9BWF3 364 aaKnown RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 CCNB1IP1Q9NPC3 277 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 IFT80Q9P2H3 777 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 SH3GLB1Q9Y371 365 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 BCORQ6W2J9 1755 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 HMGCLP35914 325 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 EEFSECP57772 596 aaKnown RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 PAQR9Q6ZVX9 377 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 CBR4Q8N4T8 237 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ASB9Q96DX5 294 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 TOX2Q96NM4 488 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 CASD1Q96PB1 797 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 SMPD3Q9NY59 655 aaPredicted RBP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 MAP4K5Q9Y4K4 846 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 WASF2Q9Y6W5 498 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ZCWPW2A0A1B0GU75 182 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 FAM149AA5PLN7 773 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 LOC730098B7Z3J9 87 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 PCDH7O60245 1069 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 LEFTY1O75610 366 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 BMP7P18075 431 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 PEX2P28328 305 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 NDUFS1P28331 727 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 BLKP51451 505 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 CLCN4P51793 760 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 MOGSQ13724 837 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 SLBPQ14493 270 aaKnown RBP eCLIP13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ZNF805Q5CZA5 627 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 CDC73Q6P1J9 531 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 GOLGA7Q7Z5G4 137 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 EPHX4Q8IUS5 362 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 SLC39A11Q8N1S5 342 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 LRRC58Q96CX6 371 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 SRMSQ9H3Y6 488 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
BRAT1-203ENST00000467558 ACTR1BP42025 376 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 GDF5P43026 501 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 MTPNP58546 118 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 ACTR1AP61163 376 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 SP140Q13342 867 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 DGUOKQ16854 277 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 PLEKHM3Q6ZWE6 761 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 TTLQ8NG68 377 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 FBXL12Q9NXK8 326 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 ZNF282Q9UDV7 671 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 CXCR6O00574 342 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 MT-ND1P03886 318 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 RPS9P46781 194 aaKnown RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 NDUFA9Q16795 377 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 PRAMEF14Q5SWL7 426 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 PRAMEF13Q5VWM6 474 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 ZCCHC7Q8N3Z6 543 aaKnown RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 LRTOMTQ8WZ04 291 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 TFGQ92734 400 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 SLC22A18Q96BI1 424 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 CARS2Q9HA77 564 aaKnown RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 FABP3P05413 133 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 VARSP26640 1264 aaKnown RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 GSTM5P46439 218 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 ARSDP51689 593 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 PLEKHS1Q5SXH7 462 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 SLC8B1Q6J4K2 584 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 AGTRAPQ6RW13 159 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 CHMP1BQ7LBR1 199 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 ARL10Q8N8L6 244 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 MARCH4Q9P2E8 410 aaPredicted RBP13.5□□□□□ -0.25
BRAT1-203ENST00000467558 GTF2A1LQ9UNN4 478 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 TMED5Q9Y3A6 229 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 WASH4PA8MWX3 477 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 OR1I1O60431 355 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 TSPAN19P0C672 248 aa13.5□□□□□ -0.25
BRAT1-203ENST00000467558 HLA-EP13747 358 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms