RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 FEZF1A0PJY2 475 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 LNP1A1A4G5 178 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 HEPACAM2A8MVW5 462 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 IDH3BO43837 385 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 CREB3O43889 395 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 RNASEH1O60930 286 aaKnown RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 RSL1D1O76021 490 aaKnown RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 C22orf31O95567 290 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 DUX4L4P0CJ87 422 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 HSPA1AP0DMV8 641 aaKnown RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 HSPA1BP0DMV9 641 aaKnown RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 RARGP13631 454 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 GUCY2DQ02846 1103 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 CXCL9Q07325 125 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 DLG2Q15700 870 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 ZSCAN23Q3MJ62 389 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 FAM98BQ52LJ0 330 aaKnown RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 MDH1BQ5I0G3 518 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 SPDYCQ5MJ68 293 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 KLHL35Q6PF15 583 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 PTAR1Q7Z6K3 402 aaPredicted RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 CPLX4Q7Z7G2 160 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 HOGA1Q86XE5 327 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 CATSPERDQ86XM0 798 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 TICAM1Q8IUC6 712 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 FAM114A1Q8IWE2 563 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 OR52N5Q8NH56 324 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 MIPOL1Q8TD10 442 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 PGAM5Q96HS1 289 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 OR6C1Q96RD1 312 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 BTBD10Q9BSF8 475 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 PITPNM3Q9BZ71 974 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 SHARPINQ9H0F6 387 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 THAP2Q9H0W7 228 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 DPAGT1Q9H3H5 408 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 FGF21Q9NSA1 209 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 PANK4Q9NVE7 773 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 NUDT4Q9NZJ9 180 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 TUBE1Q9UJT0 475 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 GRID1Q9ULK0 1009 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 CORO1CQ9ULV4 474 aaPredicted RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 PPP1R3CQ9UQK1 317 aa2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 PRRC2AP48634 2157 aaKnown RBP2.4□□□□□ -2.03
GTF3C3-209ENST00000466862 HYKKA2RU49 373 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 SHISA7A6NL88 538 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 IGHV3-13P01766 116 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 SLC6A6P31641 620 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 SUOXP51687 545 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 PAX9P55771 341 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 PAX8Q06710 450 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 FASTKD3Q14CZ7 662 aaKnown RBP2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 E2F5Q15329 346 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 XKR3Q5GH77 459 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 SLC25A47Q6Q0C1 308 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 INTS8Q75QN2 995 aaKnown RBP2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 WDTC1Q8N5D0 677 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 POM121L12Q8N7R1 296 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 OR2AJ1Q8NGZ0 328 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 OR2L2Q8NH16 312 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 GATAD1Q8WUU5 269 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 C10orf90Q96M02 699 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 PPM1MQ96MI6 270 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 CPVLQ9H3G5 476 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 SH2D4AQ9H788 454 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 MAN2C1Q9NTJ4 1040 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 C9orf78Q9NZ63 289 aaPredicted RBP2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 PPP2R2CQ9Y2T4 447 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 HCFC1P51610 2035 aa2.39□□□□□ -2.03
GTF3C3-209ENST00000466862 TDRD9Q8NDG6 1382 aaKnown RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 A0A1W2PR80 420 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 B4E171 279 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 SSX4O60224 188 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 MITFO75030 526 aaPredicted RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 SEC24AO95486 1093 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 SCGB1D1O95968 90 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 MMP9P14780 707 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 GARSP41250 739 aaKnown RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 TSPAN7P41732 249 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 PDX1P52945 283 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 MS4A2Q01362 244 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 ZRSR2Q15696 482 aaKnown RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 ITPRIPL2Q3MIP1 535 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 PDLIM3Q53GG5 364 aaPredicted RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 SLC25A30Q5SVS4 291 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 TMEM154Q6P9G4 183 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 SLC47A2Q86VL8 602 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 SLC39A11Q8N1S5 342 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 AQP11Q8NBQ7 271 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 NAXEQ8NCW5 288 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 PPFIBP2Q8ND30 876 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 PAPD5Q8NDF8 572 aaKnown RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 MOSPD2Q8NHP6 518 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 PHLDA1Q8WV24 401 aaPredicted RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 POMGNT1Q8WZA1 660 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 IRGQQ8WZA9 623 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 MOAP1Q96BY2 351 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 CMTM3Q96MX0 182 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 DGCR6LQ9BY27 220 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 GNB4Q9HAV0 340 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms