RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PREBQ9HCU5 417 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 IGSF5Q9NSI5 407 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 ABCF3Q9NUQ8 709 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 XPR1Q9UBH6 696 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 TMCO1Q9UM00 188 aa13.57□□□□□ -0.24
HDAC6-215ENST00000465457 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-215ENST00000465457 A0A0G2JND7 137 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 TSPAN11A1L157 253 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 POM121BA6NF01 834 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 NPHS1O60500 1241 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 SRP72O76094 671 aaKnown RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 HSPA4LO95757 839 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 SLC4A1P02730 911 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 CCDC166P0CW27 439 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 NME1P15531 152 aaKnown RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 ALOX15P16050 662 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF30P17039 623 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 HNRNPA2B1P22626 353 aaKnown RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 SPAM1P38567 509 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 ACTN3Q08043 901 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 CSHL1Q14406 222 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 SEMA3AQ14563 771 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 TBCCQ15814 346 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 C4orf17Q53FE4 359 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 GDPD4Q6W3E5 623 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 SNX20Q7Z614 316 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 SLC35F3Q8IY50 421 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 TMEM151AQ8N4L1 468 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 OR6K2Q8NGY2 324 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 RHEBL1Q8TAI7 183 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 HEXDCQ8WVB3 486 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 KCNJ9Q92806 393 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 NXNL1Q96CM4 212 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 BMFQ96LC9 184 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 PLEKHG4BQ96PX9 1271 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 HEPHQ9BQS7 1158 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 DUSP23Q9BVJ7 150 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 DRC3Q9H069 523 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 CDH19Q9H159 772 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 ZDHHC6Q9H6R6 413 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 SAR1AQ9NR31 198 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF358Q9NW07 568 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 NCKIPSDQ9NZQ3 722 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 DCTN4Q9UJW0 460 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 PNMA8BQ9ULN7 279 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-215ENST00000465457 CRYL1Q9Y2S2 319 aa13.56□□□□□ -0.24
HDAC6-215ENST00000465457 ANKRD36A6QL64 1941 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 UBA6A0AVT1 1052 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 BLACEA4D250 179 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 NEMP2A6NFY4 417 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 PLD2O14939 933 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 SPINT1O43278 529 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 CCDC22O60826 627 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 DNAJC8O75937 253 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 F7P08709 466 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF37AP17032 561 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF7P17097 686 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 CTPS1P17812 591 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 UGT1A5P35504 534 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 SCTRP47872 440 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 RASSF2P50749 326 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 CDKN2DP55273 166 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 XIAPP98170 497 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 BNIP1Q12981 228 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 PRKAA1Q13131 559 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 PEX6Q13608 980 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 RCN2Q14257 317 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 PTPRCAPQ14761 206 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF549Q6P9A3 640 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 DPY19L3Q6ZPD9 716 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ZCCHC23Q6ZST2 131 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 HORMAD1Q86X24 394 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 RAVER1Q8IY67 606 aaKnown RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 AFAP1L2Q8N4X5 818 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 FITM2Q8N6M3 262 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 OR2A12Q8NGT7 310 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 RFWD2Q8NHY2 731 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ULK4Q96C45 1275 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ERP27Q96DN0 273 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 PSMG3-AS1Q96PY0 264 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 TRMOQ9BU70 441 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 DERL2Q9GZP9 239 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ILKAPQ9H0C8 392 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 TFB2MQ9H5Q4 396 aaKnown RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 DKK3Q9UBP4 350 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ZFP69BQ9UJL9 534 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 HAO1Q9UJM8 370 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
HDAC6-215ENST00000465457 OAS3Q9Y6K5 1087 aaKnown RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 ZNF106Q9H2Y7 1883 aaKnown RBP13.55□□□□□ -0.24
HDAC6-215ENST00000465457 TRBV5-4A0A0C4DH59 114 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 GLYATL1P3A0A0U1RQE8 302 aa13.54□□□□□ -0.24
HDAC6-215ENST00000465457 RGSL1A5PLK6 1076 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms