RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 MAP3K3Q99759 626 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 PHACTR1Q9C0D0 580 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 SRMSQ9H3Y6 488 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 SAYSD1Q9NPB0 183 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 SMYD2Q9NRG4 433 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 THSD1Q9NS62 852 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 POLG2Q9UHN1 485 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 RUVBL2Q9Y230 463 aaKnown RBP17.17■□□□□ 0.34
VPS52-214ENST00000463486 DHRS7Q9Y394 339 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 PCDHGA3Q9Y5H0 932 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 PSAT1Q9Y617 370 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 COMMD10Q9Y6G5 202 aa17.17■□□□□ 0.34
VPS52-214ENST00000463486 A0A087WV48 116 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 CTAGE15A4D2H0 777 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 EFCAB7A8K855 629 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 CTAGE8P0CG41 777 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 POLR2CP19387 275 aaPredicted RBP17.16■□□□□ 0.34
VPS52-214ENST00000463486 PPM1FP49593 454 aaPredicted RBP17.16■□□□□ 0.34
VPS52-214ENST00000463486 GPX6P59796 221 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 KYNUQ16719 465 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 CCSMST1Q4G0I0 132 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 RBM20Q5T481 1227 aaKnown RBP17.16■□□□□ 0.34
VPS52-214ENST00000463486 CYHR1Q6ZMK1 362 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 CYS1Q717R9 158 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 CTAGE6Q86UF2 777 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 OOSP2Q86WS3 158 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 CTAGE4Q8IX94 777 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 SIDT2Q8NBJ9 832 aaKnown RBP17.16■□□□□ 0.34
VPS52-214ENST00000463486 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 CD200R1Q8TD46 325 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 SPRY4Q9C004 299 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 FOXJ2Q9P0K8 574 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 POMT2Q9UKY4 750 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 PLAGL1Q9UM63 463 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 SSUH2Q9Y2M2 353 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 ZFYVE26Q68DK2 2539 aa17.16■□□□□ 0.34
VPS52-214ENST00000463486 PRAMEF10O60809 474 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 C1orf105O95561 183 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 NELFEP18615 380 aaKnown RBP17.15■□□□□ 0.34
VPS52-214ENST00000463486 CD9P21926 228 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 SSTR1P30872 391 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 MAPK10P53779 464 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 CDKN2DP55273 166 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 SH3BP2P78314 561 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 MGAT5Q09328 741 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 CACHD1Q5VU97 1274 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 FBXO38Q6PIJ6 1188 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 LINC01555Q8NAE3 123 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 CFAP61Q8NHU2 1237 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 PYROXD1Q8WU10 500 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 TAAR9Q96RI9 348 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 CD180Q99467 661 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 NDNQ99608 321 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 GPR21Q99679 349 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 PITPNM3Q9BZ71 974 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 ZMYND15Q9H091 742 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 FBXO8Q9NRD0 319 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 SPHK1Q9NYA1 384 aa17.15■□□□□ 0.34
VPS52-214ENST00000463486 PTPRQQ9UMZ3 2332 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 ADAMTS20P59510 1910 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 KRT87PA6NCN2 255 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 TLCD2A6NGC4 264 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 CXorf49A8MYA2 514 aaPredicted RBP17.14■□□□□ 0.33
VPS52-214ENST00000463486 PIAS1O75925 651 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 PRDX3P30048 256 aaKnown RBP17.14■□□□□ 0.33
VPS52-214ENST00000463486 ECHS1P30084 290 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 PEBP1P30086 187 aaKnown RBP17.14■□□□□ 0.33
VPS52-214ENST00000463486 PKLRP30613 574 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 SEPHS1P49903 392 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 GLE1Q53GS7 698 aaKnown RBP17.14■□□□□ 0.33
VPS52-214ENST00000463486 DCUN1D3Q8IWE4 304 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 LMNTD1Q8N9Z9 388 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 DENND1AQ8TEH3 1009 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 UBXN4Q92575 508 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 DDA1Q9BW61 102 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 APMAPQ9HDC9 416 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 PPANQ9NQ55 473 aaKnown RBP17.14■□□□□ 0.33
VPS52-214ENST00000463486 SLC39A1Q9NY26 324 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 OR6C2Q9NZP2 312 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 AKAP7Q9P0M2 348 aaPredicted RBP17.14■□□□□ 0.33
VPS52-214ENST00000463486 CIDEBQ9UHD4 219 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 TDRKHQ9Y2W6 561 aaKnown RBP17.14■□□□□ 0.33
VPS52-214ENST00000463486 B3GALT1Q9Y5Z6 326 aa17.14■□□□□ 0.33
VPS52-214ENST00000463486 TCRBV9S1A1TA0A576 114 aa17.13■□□□□ 0.33
VPS52-214ENST00000463486 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.13■□□□□ 0.33
VPS52-214ENST00000463486 E5RI56 91 aa17.13■□□□□ 0.33
VPS52-214ENST00000463486 PRICKLE3O43900 615 aaPredicted RBP17.13■□□□□ 0.33
VPS52-214ENST00000463486 PSIP1O75475 530 aaKnown RBP17.13■□□□□ 0.33
VPS52-214ENST00000463486 RASSF9O75901 435 aa17.13■□□□□ 0.33
VPS52-214ENST00000463486 CHRM5P08912 532 aaPredicted RBP17.13■□□□□ 0.33
VPS52-214ENST00000463486 SHMT2P34897 504 aa17.13■□□□□ 0.33
VPS52-214ENST00000463486 MAGEA4P43358 317 aa17.13■□□□□ 0.33
VPS52-214ENST00000463486 PGGT1BP53609 377 aa17.13■□□□□ 0.33
VPS52-214ENST00000463486 PCBP4P57723 403 aaKnown RBP17.13■□□□□ 0.33
VPS52-214ENST00000463486 CUL1Q13616 776 aa17.13■□□□□ 0.33
VPS52-214ENST00000463486 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.13■□□□□ 0.33
VPS52-214ENST00000463486 DNTTIP2Q5QJE6 756 aaKnown RBP17.13■□□□□ 0.33
VPS52-214ENST00000463486 ANKS6Q68DC2 871 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms