RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 CSO75390 466 aaKnown RBP9.77□□□□□ -0.85
ATG4A-206ENST00000457035 VPS26AO75436 327 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 AMD1P17707 334 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 FDXRP22570 491 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 TNFRSF8P28908 595 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 CCKBRP32239 447 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 STX2P32856 288 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 PGGT1BP53609 377 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 LIMK2P53671 638 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 GRB7Q14451 532 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 KRT33BQ14525 404 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 SLMAPQ14BN4 828 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 UGT3A1Q6NUS8 523 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 PAQR3Q6TCH7 311 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 TMEM207Q6UWW9 146 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 UNC5DQ6UXZ4 953 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 NEK10Q6ZWH5 1172 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 RASGRP3Q8IV61 690 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 CTAGE3PQ8IX95 158 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 PPM1NQ8N819 430 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 GPATCH11Q8N954 259 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 OR4E2Q8NGC2 313 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 OR4D9Q8NGE8 314 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 OR52E1Q8NGJ3 308 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 CFAP61Q8NHU2 1237 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 RSC1A1Q92681 617 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 GRAMD1AQ96CP6 724 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 VPS39Q96JC1 886 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 DEPDC7Q96QD5 511 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 OLFM1Q99784 485 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 DPYSL5Q9BPU6 564 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 TWSG1Q9GZX9 223 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 RAB33BQ9H082 229 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 TRIT1Q9H3H1 467 aaKnown RBP9.77□□□□□ -0.85
ATG4A-206ENST00000457035 ACSS3Q9H6R3 686 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 SYNDIG1Q9H7V2 258 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 TMEM9Q9P0T7 183 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 EPHA6Q9UF33 1036 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 POLG2Q9UHN1 485 aa9.77□□□□□ -0.85
ATG4A-206ENST00000457035 RUVBL2Q9Y230 463 aaKnown RBP9.77□□□□□ -0.85
ATG4A-206ENST00000457035 MTO1Q9Y2Z2 717 aaKnown RBP9.77□□□□□ -0.85
ATG4A-206ENST00000457035 FAM208BQ5VWN6 2430 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 FAM95CA0A1B0GW59 222 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 A0A1W2PNU3 283 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TMX2-CTNND1H3BSU7 103 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 GFYI3L273 518 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 EIF3FO00303 357 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 CAPN5O15484 640 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 DUX1O43812 170 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 PSIP1O75475 530 aaKnown RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 FAM155BO75949 473 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 C1orf105O95561 183 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 ACSL3O95573 720 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TSPAN12O95859 305 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 C9P02748 559 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 MPC1LP0DKB6 136 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 CBSLP0DN79 551 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 ENO3P13929 434 aaPredicted RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 MCM3P25205 808 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 MPSTP25325 297 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 PHBP35232 272 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 CBSP35520 551 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 GP5P40197 560 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 MAPK9P45984 424 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 INHBCP55103 352 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 GFERP55789 205 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TAS2R39P59534 338 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 ILF2Q12905 390 aaKnown RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 NAB1Q13506 487 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 EFTUD2Q15029 972 aaKnown RBP eCLIP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TTLL9Q3SXZ7 439 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 GRTP1Q5TC63 336 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 FAM45BPQ6NSW5 357 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TRMT10CQ7L0Y3 403 aaKnown RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 ARHGAP22Q7Z5H3 698 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 CPNE9Q8IYJ1 553 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 FAM45AQ8TCE6 357 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 EEF1AKMT1Q8WVE0 214 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 LCN9Q8WX39 176 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 ASB11Q8WXH4 323 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 ATXN7L3BQ96GX2 97 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TMEM74Q96NL1 305 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 CYTH2Q99418 400 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 RBBP8Q99708 897 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 HGH1Q9BTY7 390 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 MENTQ9BUN1 341 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 EPB41L4BQ9H329 900 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 HRASLS2Q9NWW9 162 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 SEMA5BQ9P283 1151 aa9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TRMT6Q9UJA5 497 aaKnown RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 TDRKHQ9Y2W6 561 aaKnown RBP9.76□□□□□ -0.85
ATG4A-206ENST00000457035 CELSR3Q9NYQ7 3312 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 FREM2Q5SZK8 3169 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 HMX2A2RU54 273 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 OR6C74A6NCV1 312 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 OR5K3A6NET4 321 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 TRABD2BA6NFA1 517 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 BTN3A3O00478 584 aa9.75□□□□□ -0.85
ATG4A-206ENST00000457035 WISP3O95389 354 aaPredicted RBP9.75□□□□□ -0.85
ATG4A-206ENST00000457035 THRAP10827 490 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms