RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 USP29Q9HBJ7 922 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 SLC2A4RGQ9NR83 387 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 PNO1Q9NRX1 252 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 MCUBQ9NWR8 336 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 THUMPD1Q9NXG2 353 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 KLF15Q9UIH9 416 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CLCA3PQ9Y6N3 262 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 MTMR11A4FU01 709 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CAPN14A8MX76 684 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 PRKAR1AP10644 381 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 DNASE1L1P49184 302 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 NFKB2Q00653 900 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 DCTN2Q13561 401 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CMASQ8NFW8 434 aaPredicted RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 ZNF483Q8TF39 744 aaPredicted RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CDKN2AIPNLQ96HQ2 116 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 GPATCH1Q9BRR8 931 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 GTPBP2Q9BX10 602 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 DSN1Q9H410 356 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 PLGRKTQ9HBL7 147 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 NME6O75414 186 aaPredicted RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 SLBPQ14493 270 aaKnown RBP eCLIP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 DENND5AQ6IQ26 1287 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 FBXO42Q6P3S6 717 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 OR52J3Q8NH60 311 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 OR4C6Q8NH72 309 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 HM13Q8TCT9 377 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 GIPC3Q8TF64 312 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 SLC35F5Q8WV83 523 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 MTERF1Q99551 399 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 C1QTNF1Q9BXJ1 281 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 SNED1Q8TER0 1413 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 PGM3O95394 542 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 SNAI1O95863 264 aaPredicted RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 ADH1BP00325 375 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 IDH3AP50213 366 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CRISP3P54108 245 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 MLLT6P55198 1093 aaPredicted RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 ADARP55265 1226 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 AP1S2P56377 157 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CMTM8Q8IZV2 173 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 SLC13A3Q8WWT9 602 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 ESAMQ96AP7 390 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CLPTM1LQ96KA5 538 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 DNAAF2Q9NVR5 837 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 FADS2O95864 444 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 TCF4P15884 667 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 ZNF823P16415 610 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 ACVRL1P37023 503 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 CLCNKAP51800 687 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 HERVK_113P63132 956 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 RGS21Q2M5E4 152 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 WDR45BQ5MNZ6 344 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 PHF19Q5T6S3 580 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 LRRC70Q7Z2Q7 622 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 THAP5Q7Z6K1 395 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 OSTM1Q86WC4 334 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 RBM15BQ8NDT2 890 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 OR10A6Q8NH74 314 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 DGAT2Q96PD7 388 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 RAD9AQ99638 391 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 ERVK-6Q9BXR3 956 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 PLEKHA1Q9HB21 404 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 RSL24D1Q9UHA3 163 aaKnown RBP10.01□□□□□ -0.81
SCN10A-201ENST00000449082 DUOX1Q9NRD9 1551 aa10.01□□□□□ -0.81
SCN10A-201ENST00000449082 A0A1W2PRB8 838 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 HAS3O00219 553 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 LEFTY2O00292 366 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 RGS10O43665 173 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 TCEA1P23193 301 aaKnown RBP10□□□□□ -0.81
SCN10A-201ENST00000449082 ARRB1P49407 418 aaPredicted RBP10□□□□□ -0.81
SCN10A-201ENST00000449082 SIM2Q14190 667 aaPredicted RBP10□□□□□ -0.81
SCN10A-201ENST00000449082 FAM174BQ3ZCQ3 159 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 FRRS1Q6ZNA5 592 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 SVOPLQ8N434 492 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 FAM47BQ8NA70 645 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 PJA1Q8NG27 643 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 DENND1AQ8TEH3 1009 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 C12orf65Q9H3J6 166 aaKnown RBP10□□□□□ -0.81
SCN10A-201ENST00000449082 MCCC2Q9HCC0 563 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 ABCB10Q9NRK6 738 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 RAPGEFL1Q9UHV5 662 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 J3KR12 359 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 NIPSNAP2O75323 286 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 RSL1D1O76021 490 aaKnown RBP10□□□□□ -0.81
SCN10A-201ENST00000449082 ALOX5P09917 674 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 THRBP10828 461 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 CSNK2A2P19784 350 aaPredicted RBP10□□□□□ -0.81
SCN10A-201ENST00000449082 CDH12P55289 794 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 PAQR3Q6TCH7 311 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 TPRG1Q6ZUI0 275 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 POC5Q8NA72 575 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 ZNF527Q8NB42 609 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 CYP2S1Q96SQ9 504 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 NDC1Q9BTX1 674 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10□□□□□ -0.81
SCN10A-201ENST00000449082 CXCR6O00574 342 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 IMPDH1P20839 514 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 ACADLP28330 430 aa10□□□□□ -0.81
SCN10A-201ENST00000449082 CCNHP51946 323 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms