RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 TMEM220Q6QAJ8 160 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 KIRREL2Q6UWL6 708 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 LINC00696Q6ZRV3 163 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 TGIF2LYQ8IUE0 185 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 RASGEF1AQ8N9B8 481 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 CHDHQ8NE62 594 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-203ENST00000447360 ACVR1CQ8NER5 493 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 OR2L2Q8NH16 312 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 ADAMTS18Q8TE60 1221 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 LCN9Q8WX39 176 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 HSPH1Q92598 858 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 HAS2Q92819 552 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.83□□□□□ -1.32
LRRC28-203ENST00000447360 FKBP10Q96AY3 582 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 THOC3Q96J01 351 aaKnown RBP6.83□□□□□ -1.32
LRRC28-203ENST00000447360 TRIB3Q96RU7 358 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 WWP1Q9H0M0 922 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 THAP2Q9H0W7 228 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 CXXC4Q9H2H0 198 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 SRMSQ9H3Y6 488 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 WDR54Q9H977 334 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 MRM3Q9HC36 420 aaKnown RBP6.83□□□□□ -1.32
LRRC28-203ENST00000447360 PCDH18Q9HCL0 1135 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 GPAMQ9HCL2 828 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 TXLNGQ9NUQ3 528 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.83□□□□□ -1.32
LRRC28-203ENST00000447360 MYO1AQ9UBC5 1043 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 LUC7L2Q9Y383 392 aaKnown RBP6.83□□□□□ -1.32
LRRC28-203ENST00000447360 ZNF711Q9Y462 761 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 HS3ST3B1Q9Y662 390 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 JMJD1CQ15652 2540 aa6.83□□□□□ -1.32
LRRC28-203ENST00000447360 TMEM200CA6NKL6 621 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 OR2AG2A6NM03 316 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 C2orf74A8MZ97 194 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 BTN3A1O00481 513 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 MFSD11O43934 449 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 ALOX12BO75342 701 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 KLHL18O94889 574 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 RASAL1O95294 804 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 ONECUT2O95948 504 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SLC4A1P02730 911 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 CYP1A2P05177 515 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SLC35G4P0C7Q5 338 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 PIRTP0C851 137 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 MYBL1P10243 752 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 RARAP10276 462 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 PIM1P11309 404 aaPredicted RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 MX2P20592 715 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 HMGCLP35914 325 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 FOXL2P58012 376 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 CSNK1G2P78368 415 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SLC9A5Q14940 896 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 PAFAH1B3Q15102 231 aaKnown RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 CDSNQ15517 529 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 NFKBIBQ15653 356 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 LONRF1Q17RB8 773 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SLC5A12Q1EHB4 618 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 LONRF2Q1L5Z9 754 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 TUBB8Q3ZCM7 444 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 TXNRD3NBQ6F5E7 133 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 ALKBH5Q6P6C2 394 aaKnown RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 OVCH1Q7RTY7 1134 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 C19orf47Q8N9M1 422 aaKnown RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 DDHD1Q8NEL9 900 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 OR11G2Q8NGC1 345 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 DENND1AQ8TEH3 1009 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 IQCDQ96DY2 449 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 BTBD6Q96KE9 485 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 FOXC2Q99958 501 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 CCM2Q9BSQ5 444 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 NDC1Q9BTX1 674 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SPRTNQ9H040 489 aaPredicted RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SLC26A1Q9H2B4 701 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 TFB2MQ9H5Q4 396 aaKnown RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 MRPL47Q9HD33 250 aaKnown RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 IL26Q9NPH9 171 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SEMA3GQ9NS98 782 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SLC22A11Q9NSA0 550 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 DHCR7Q9UBM7 475 aaKnown RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 TNFRSF10DQ9UBN6 386 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SH3BGRL2Q9UJC5 107 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 NXT1Q9UKK6 140 aaKnown RBP6.82□□□□□ -1.32
LRRC28-203ENST00000447360 SCINQ9Y6U3 715 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 STAB1Q9NY15 2570 aa6.82□□□□□ -1.32
LRRC28-203ENST00000447360 ABCA4P78363 2273 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 NSD1Q96L73 2696 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 BHMG1C9JSJ3 638 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-203ENST00000447360 BTN3A3O00478 584 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 PMPCBO75439 489 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 USP1O94782 785 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 MYBL2P10244 700 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 PVRP15151 417 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 FOSL1P15407 271 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 KLK2P20151 261 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 ITGAXP20702 1163 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 FDXRP22570 491 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 MST1P26927 711 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 GABRA4P48169 554 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 MMP16P51512 607 aa6.81□□□□□ -1.32
LRRC28-203ENST00000447360 PPP2R2AP63151 447 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms