RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 GPATCH1Q9BRR8 931 aaKnown RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 TRMT61BQ9BVS5 477 aaKnown RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 PLA2G2FQ9BZM2 168 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 TRIM39Q9HCM9 518 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 C6orf203Q9P0P8 240 aaPredicted RBP15.31■□□□□ 0.04
SNX13-204ENST00000444712 ABCD2Q9UBJ2 740 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 PSMD13Q9UNM6 376 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 COQ6Q9Y2Z9 468 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 RNF11Q9Y3C5 154 aa15.31■□□□□ 0.04
SNX13-204ENST00000444712 C15orf38-AP3S2A0A0A6YYH1 394 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 AP1G1O43747 822 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 ADH1BP00325 375 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 SOD1P00441 154 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 ATP6V1C1P21283 382 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 P2RY2P41231 377 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 MTHFRP42898 656 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 GNPDA1P46926 289 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 METAP1P53582 386 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 ENPP2Q13822 863 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 ZNF648Q5T619 568 aaPredicted RBP15.3■□□□□ 0.04
SNX13-204ENST00000444712 CACHD1Q5VU97 1274 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 ARPINQ7Z6K5 226 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 RETREG3Q86VR2 466 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 ZFAND4Q86XD8 727 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 TMEM126BQ8IUX1 230 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 L3MBTL4Q8NA19 623 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 FBXO15Q8NCQ5 510 aaPredicted RBP15.3■□□□□ 0.04
SNX13-204ENST00000444712 HIPK4Q8NE63 616 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 BHLHE22Q8NFJ8 381 aaPredicted RBP15.3■□□□□ 0.04
SNX13-204ENST00000444712 NRG4Q8WWG1 115 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 LINC00615Q96LM1 132 aaPredicted RBP15.3■□□□□ 0.04
SNX13-204ENST00000444712 ZBTB18Q99592 522 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 CD300AQ9UGN4 299 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 CNOT6Q9ULM6 557 aaKnown RBP15.3■□□□□ 0.04
SNX13-204ENST00000444712 GPR34Q9UPC5 381 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 CCL27Q9Y4X3 112 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 FADS3Q9Y5Q0 445 aa15.3■□□□□ 0.04
SNX13-204ENST00000444712 C17orf113A0A1B0GUU1 675 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 SERTM1A2A2V5 107 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 ACOT8O14734 319 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 MMP20O60882 483 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 JAK1P23458 1154 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 UFM1P61960 85 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 ADAM15Q13444 863 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 EGFLAMQ63HQ2 1017 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 CYP20A1Q6UW02 462 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 LAYNQ6UX15 382 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 GLB1L3Q8NCI6 653 aaPredicted RBP15.29■□□□□ 0.04
SNX13-204ENST00000444712 MUC13Q9H3R2 512 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 ELOVL6Q9H5J4 265 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 SLC52A3Q9NQ40 469 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 MAP10Q9P2G4 905 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 PACSIN3Q9UKS6 424 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 STON1Q9Y6Q2 735 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 H3BM21 787 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 RFXAPO00287 272 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 FFAR3O14843 346 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 GPR42O15529 346 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 SLC2A4P14672 509 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 TNFRSF4P43489 277 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 SLC7A2P52569 658 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 BNIP2Q12982 314 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 NFYCQ13952 458 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 IL23RQ5VWK5 629 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 LIPJQ5W064 366 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 RNF148Q8N7C7 305 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 PROKR1Q8TCW9 393 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 LRRC58Q96CX6 371 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 ZNF184Q99676 751 aaPredicted RBP15.29■□□□□ 0.04
SNX13-204ENST00000444712 GDF15Q99988 308 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 TRIM15Q9C019 465 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 LRTM1Q9HBL6 345 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 MCM8Q9UJA3 840 aa15.29■□□□□ 0.04
SNX13-204ENST00000444712 POLR3HQ9Y535 204 aaPredicted RBP15.29■□□□□ 0.04
SNX13-204ENST00000444712 ARHGEF33A8MVX0 844 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 RSL1D1O76021 490 aaKnown RBP15.28■□□□□ 0.04
SNX13-204ENST00000444712 HSD17B1P14061 328 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 EPORP19235 508 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 PRPH2P23942 346 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 MAPK1P28482 360 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 ERFP50548 548 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 RPL38P63173 70 aaKnown RBP15.28■□□□□ 0.04
SNX13-204ENST00000444712 CNTN1Q12860 1018 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 ABRQ12979 859 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 CAMK2GQ13555 558 aaPredicted RBP15.28■□□□□ 0.04
SNX13-204ENST00000444712 PIP5KL1Q5T9C9 394 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 ADAMTSL4Q6UY14 1074 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 TRAPPC5Q8IUR0 188 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 SFTPA1Q8IWL2 248 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 SELENOMQ8WWX9 145 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 HIC2Q96JB3 615 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 RSPH9Q9H1X1 276 aaPredicted RBP15.28■□□□□ 0.04
SNX13-204ENST00000444712 OR2AG1Q9H205 316 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 C1orf109Q9NX04 203 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 TICRRQ7Z2Z1 1910 aa15.28■□□□□ 0.04
SNX13-204ENST00000444712 TMEM202A6NGA9 273 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 NPIPB8E9PQR5 432 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 CASQ2O14958 399 aaPredicted RBP15.27■□□□□ 0.04
SNX13-204ENST00000444712 C5AR1P21730 350 aa15.27■□□□□ 0.04
SNX13-204ENST00000444712 ZFP36L2P47974 494 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms