RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 HM13Q8TCT9 377 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 FAF2Q96CS3 445 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 MESP1Q9BRJ9 268 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 CCM2Q9BSQ5 444 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 HGH1Q9BTY7 390 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 CHRNA10Q9GZZ6 450 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 TRABDQ9H4I3 376 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 SOX17Q9H6I2 414 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-202ENST00000442515 WDR54Q9H977 334 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 PLA2G3Q9NZ20 509 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.4□□□□□ -0.26
LINC00642-202ENST00000442515 IP6K2Q9UHH9 426 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 TINAGQ9UJW2 476 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 LRRC53A6NM62 1247 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 BUD23O43709 281 aaKnown RBP13.39□□□□□ -0.27
LINC00642-202ENST00000442515 SGTAO43765 313 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 PMPCBO75439 489 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 ALBP02768 609 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 PYGMP11217 842 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 ESRRAP11474 423 aaPredicted RBP13.39□□□□□ -0.27
LINC00642-202ENST00000442515 DRD2P14416 443 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 UGT2B7P16662 529 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 ALAS2P22557 587 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 GCGRP47871 477 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 AP1B1Q10567 949 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
LINC00642-202ENST00000442515 OVCH1Q7RTY7 1134 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 ACBD4Q8NC06 268 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 KCTD6Q8NC69 237 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 ZNF160Q9HCG1 818 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 FANCLQ9NW38 375 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 CTSFQ9UBX1 484 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 MYO6Q9UM54 1294 aa13.39□□□□□ -0.27
LINC00642-202ENST00000442515 A0A1B0GX78 115 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 IFRD1O00458 451 aaPredicted RBP13.38□□□□□ -0.27
LINC00642-202ENST00000442515 FANCGO15287 622 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 PRAMEF1O95521 474 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 F10P00742 488 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 CRYABP02511 175 aaKnown RBP13.38□□□□□ -0.27
LINC00642-202ENST00000442515 SOX11P35716 441 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 CSNK1G2P78368 415 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 PRKG2Q13237 762 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 HADHQ16836 314 aaKnown RBP13.38□□□□□ -0.27
LINC00642-202ENST00000442515 SLC5A12Q1EHB4 618 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 TTLL10Q6ZVT0 673 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 GLT6D1Q7Z4J2 308 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 CPNE8Q86YQ8 564 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 PHC3Q8NDX5 983 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 ADAMTS18Q8TE60 1221 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 DLG3Q92796 817 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 VPS50Q96JG6 964 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 OR2A14Q96R47 310 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 ENKD1Q9H0I2 346 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 ISCUQ9H1K1 167 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 SLC26A1Q9H2B4 701 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 OR52A5Q9H2C5 316 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 MVB12BQ9H7P6 319 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 COG4Q9H9E3 785 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 SEMA3GQ9NS98 782 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 UBP1Q9NZI7 540 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 PTGFRNQ9P2B2 879 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
LINC00642-202ENST00000442515 ICKQ9UPZ9 632 aa13.38□□□□□ -0.27
LINC00642-202ENST00000442515 A0A0J9YY10 115 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 C17orf113A0A1B0GUU1 675 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 FAM155BO75949 473 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 USP1O94782 785 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 RASAL1O95294 804 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 ONECUT2O95948 504 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 HPP00738 406 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 CHRNA4P43681 627 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 PRLHRP49683 370 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 PDK2Q15119 407 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 MEX3BQ6ZN04 569 aaKnown RBP13.37□□□□□ -0.27
LINC00642-202ENST00000442515 DNAJC22Q8N4W6 341 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 SLC25A41Q8N5S1 370 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 PLD5Q8N7P1 536 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 DNAJB8Q8NHS0 232 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 FLVCR1-AS1Q8TAF5 88 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 ZNF398Q8TD17 642 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 BLOC1S5Q8TDH9 187 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 BRIX1Q8TDN6 353 aaKnown RBP13.37□□□□□ -0.27
LINC00642-202ENST00000442515 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.37□□□□□ -0.27
LINC00642-202ENST00000442515 PSMF1Q92530 271 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC00642-202ENST00000442515 GLOD4Q9HC38 313 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 SPHK1Q9NYA1 384 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 NXT1Q9UKK6 140 aaKnown RBP13.37□□□□□ -0.27
LINC00642-202ENST00000442515 PLCL2Q9UPR0 1127 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 PKP3Q9Y446 797 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 DOCK10Q96BY6 2186 aa13.37□□□□□ -0.27
LINC00642-202ENST00000442515 WISP2O76076 250 aa13.36□□□□□ -0.27
LINC00642-202ENST00000442515 ACPPP15309 386 aa13.36□□□□□ -0.27
LINC00642-202ENST00000442515 PRKCIP41743 596 aa13.36□□□□□ -0.27
LINC00642-202ENST00000442515 PMP22Q01453 160 aa13.36□□□□□ -0.27
LINC00642-202ENST00000442515 BOP1Q14137 746 aaKnown RBP13.36□□□□□ -0.27
LINC00642-202ENST00000442515 PTPRCAPQ14761 206 aa13.36□□□□□ -0.27
LINC00642-202ENST00000442515 SIRPB2Q5JXA9 342 aa13.36□□□□□ -0.27
LINC00642-202ENST00000442515 UNC5AQ6ZN44 842 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms