RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SEPHS1P49903 392 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 GFERP55789 205 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 TIAL1Q01085 375 aaKnown RBP eCLIP14.15□□□□□ -0.14
SGCE-204ENST00000428696 POU4F1Q01851 419 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 NAB1Q13506 487 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 BMPR2Q13873 1038 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 SLC29A2Q14542 456 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 NAA30Q147X3 362 aaPredicted RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 CCSMST1Q4G0I0 132 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 CDCP2Q5VXM1 449 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 TMEM71Q6P5X7 295 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 ZNF574Q6ZN55 896 aaPredicted RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 UBE2R2Q712K3 238 aaPredicted RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 TAX1BP1Q86VP1 789 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 SPATA6LQ8N4H0 392 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 RAB42Q8N4Z0 105 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 DCBLD1Q8N8Z6 715 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 EIF1ADQ8N9N8 165 aaKnown RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 OR4D9Q8NGE8 314 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 MAGEC3Q8TD91 643 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 CCDC74BQ96LY2 380 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 IL17FQ96PD4 163 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 PARD6BQ9BYG5 372 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 EPB41L1Q9H4G0 881 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 ACSS3Q9H6R3 686 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 GPAMQ9HCL2 828 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 AKAP7Q9P0M2 348 aaPredicted RBP14.15□□□□□ -0.14
SGCE-204ENST00000428696 ANGPTL2Q9UKU9 493 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 PIKFYVEQ9Y2I7 2098 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 AK5Q9Y6K8 562 aa14.15□□□□□ -0.14
SGCE-204ENST00000428696 ISM1B1AKI9 464 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 TMX2-CTNND1H3BSU7 103 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 PHGDHO43175 533 aaKnown RBP14.14□□□□□ -0.15
SGCE-204ENST00000428696 ZBTB14O43829 449 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 C1QAP02745 245 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 ITGA2BP08514 1039 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 MPC1LP0DKB6 136 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 STMN1P16949 149 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 CSTF2P33240 577 aaKnown RBP eCLIP14.14□□□□□ -0.15
SGCE-204ENST00000428696 SHMT2P34897 504 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 CCNFP41002 786 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 ARL4DP49703 201 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 LIMK2P53671 638 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 PPP1CAP62136 330 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 C3orf38Q5JPI3 329 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 WDR74Q6RFH5 385 aaPredicted RBP14.14□□□□□ -0.15
SGCE-204ENST00000428696 CEP97Q8IW35 865 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 DCUN1D3Q8IWE4 304 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 RAD51AP1Q96B01 352 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 DPYSL5Q9BPU6 564 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 CCDC77Q9BR77 488 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 UNKQ9C0B0 810 aaKnown RBP14.14□□□□□ -0.15
SGCE-204ENST00000428696 TFB2MQ9H5Q4 396 aaKnown RBP14.14□□□□□ -0.15
SGCE-204ENST00000428696 SYTL2Q9HCH5 934 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 LNPEPQ9UIQ6 1025 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 ICKQ9UPZ9 632 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 ENTPD2Q9Y5L3 495 aa14.14□□□□□ -0.15
SGCE-204ENST00000428696 OR5K3A6NET4 321 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 TRABD2BA6NFA1 517 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 BTN3A3O00478 584 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 KIF1CO43896 1103 aaKnown RBP14.13□□□□□ -0.15
SGCE-204ENST00000428696 MATN4O95460 622 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 MPOP05164 745 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 TNFRSF8P28908 595 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 ATP5DP30049 168 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 CAPZBP47756 277 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 ILF2Q12905 390 aaKnown RBP14.13□□□□□ -0.15
SGCE-204ENST00000428696 CACHD1Q5VU97 1274 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 CYHR1Q6ZMK1 362 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 FAM129CQ86XR2 697 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 MCOLN3Q8TDD5 553 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 ASB11Q8WXH4 323 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 PAFAH2Q99487 392 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 GPR22Q99680 433 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 KLHL25Q9H0H3 589 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 WDR70Q9NW82 654 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 TLK1Q9UKI8 766 aa14.13□□□□□ -0.15
SGCE-204ENST00000428696 UNC13CQ8NB66 2214 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 PIPSLA2A3N6 862 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 SMIM23A6NLE4 172 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 ARHGEF33A8MVX0 844 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 C2orf74A8MZ97 194 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 BTN3A1O00481 513 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 HIST1H2AGP0C0S8 130 aaPredicted RBP14.12□□□□□ -0.15
SGCE-204ENST00000428696 JMJD7P0C870 316 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 CCDC166P0CW27 439 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 HGFP14210 728 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 HIST1H2ADP20671 130 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 SQSTM1Q13501 440 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 GBX1Q14549 363 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 LRRC8EQ6NSJ5 796 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 FBXO38Q6PIJ6 1188 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 TMEM207Q6UWW9 146 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 NEK10Q6ZWH5 1172 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 TAOK1Q7L7X3 1001 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 RAB11FIP2Q7L804 512 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 CMC1Q7Z7K0 106 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 FBXO39Q8N4B4 442 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 NKAPQ8N5F7 415 aaKnown RBP14.12□□□□□ -0.15
SGCE-204ENST00000428696 OR9A1PQ8NGU1 263 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms