RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 OR6C2Q9NZP2 312 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 AMACRQ9UHK6 382 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 NENFQ9UMX5 172 aa3.72□□□□□ -1.81
LINC01040-201ENST00000425048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.72□□□□□ -1.81
LINC01040-201ENST00000425048 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.72□□□□□ -1.81
LINC01040-201ENST00000425048 RGS2P41220 211 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 DLK1P80370 383 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 DMPKQ09013 629 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 PNRC1Q12796 327 aaPredicted RBP3.71□□□□□ -1.82
LINC01040-201ENST00000425048 HEATR4Q86WZ0 1026 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 KRTAP11-1Q8IUC1 163 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 OR6S1Q8NH40 331 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 TOMM40LQ969M1 308 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 ELMOD3Q96FG2 381 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 PDLIM5Q96HC4 596 aaKnown RBP3.71□□□□□ -1.82
LINC01040-201ENST00000425048 DNAJC18Q9H819 358 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 FGF21Q9NSA1 209 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 PCDHGA5Q9Y5G8 931 aa3.71□□□□□ -1.82
LINC01040-201ENST00000425048 ANKRD61A6NGH8 418 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 IGHV4-31P0DP07 118 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 GP9P14770 177 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 SLC6A6P31641 620 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 PDX1P52945 283 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 SLC25A47Q6Q0C1 308 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 FAM198BQ6UWH4 519 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 BTN2A1Q7KYR7 527 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 ABHD12Q8N2K0 398 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 FGFRL1Q8N441 504 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 PHLDA1Q8WV24 401 aaPredicted RBP3.7□□□□□ -1.82
LINC01040-201ENST00000425048 ZNF486Q96H40 463 aaPredicted RBP3.7□□□□□ -1.82
LINC01040-201ENST00000425048 ZNF701Q9NV72 531 aaPredicted RBP3.7□□□□□ -1.82
LINC01040-201ENST00000425048 NDE1Q9NXR1 346 aa3.7□□□□□ -1.82
LINC01040-201ENST00000425048 LRRFIP2Q9Y608 721 aaKnown RBP3.7□□□□□ -1.82
LINC01040-201ENST00000425048 CCNDBP1O95273 360 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 ZFP36L2P47974 494 aaKnown RBP3.69□□□□□ -1.82
LINC01040-201ENST00000425048 PDLIM3Q53GG5 364 aaPredicted RBP3.69□□□□□ -1.82
LINC01040-201ENST00000425048 KIF6Q6ZMV9 814 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 CFAP77Q6ZQR2 320 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 GPRC5AQ8NFJ5 357 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 C10orf90Q96M02 699 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 NUP85Q9BW27 656 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 S1PR5Q9H228 398 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 PPANQ9NQ55 473 aaKnown RBP3.69□□□□□ -1.82
LINC01040-201ENST00000425048 MAN2C1Q9NTJ4 1040 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 CMAHPQ9Y471 501 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 NISCHQ9Y2I1 1504 aa3.69□□□□□ -1.82
LINC01040-201ENST00000425048 HS6ST1O60243 411 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 RNASEH1O60930 286 aaKnown RBP3.68□□□□□ -1.82
LINC01040-201ENST00000425048 VTNP04004 478 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 SRPRAP08240 638 aaKnown RBP3.68□□□□□ -1.82
LINC01040-201ENST00000425048 FOLR2P14207 255 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 CDH2P19022 906 aaPredicted RBP3.68□□□□□ -1.82
LINC01040-201ENST00000425048 IL4RP24394 825 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 PPM1FP49593 454 aaPredicted RBP3.68□□□□□ -1.82
LINC01040-201ENST00000425048 CASP6P55212 293 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 RPS3AP61247 264 aaKnown RBP3.68□□□□□ -1.82
LINC01040-201ENST00000425048 MELKQ14680 651 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 MED22Q15528 200 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 DLG2Q15700 870 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 JADE1Q6IE81 842 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 NCEH1Q6PIU2 408 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 TRIML1Q8N9V2 468 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 AQP11Q8NBQ7 271 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 OR13J1Q8NGT2 312 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 KCNG4Q8TDN1 519 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 IRGQQ8WZA9 623 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 ERLEC1Q96DZ1 483 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 NECTIN4Q96NY8 510 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 C1QTNF1Q9BXJ1 281 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 PLK3Q9H4B4 646 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 MTUS1Q9ULD2 1270 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 COL16A1Q07092 1604 aaPredicted RBP3.68□□□□□ -1.82
LINC01040-201ENST00000425048 COL4A4P53420 1690 aaPredicted RBP3.68□□□□□ -1.82
LINC01040-201ENST00000425048 CLSPNQ9HAW4 1339 aa3.68□□□□□ -1.82
LINC01040-201ENST00000425048 GPRIN2O60269 458 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 AVILO75366 819 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 THEGLP0DJG4 465 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 LHCGRP22888 699 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 MTHFRP42898 656 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 TSFMP43897 325 aaKnown RBP3.67□□□□□ -1.82
LINC01040-201ENST00000425048 MAZP56270 477 aaKnown RBP3.67□□□□□ -1.82
LINC01040-201ENST00000425048 SQLEQ14534 574 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 SARM1Q6SZW1 724 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 RAPH1Q70E73 1250 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 COMMD2Q86X83 199 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 TMEM139Q8IV31 216 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 EID3Q8N140 333 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 ATP8B4Q8TF62 1192 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 RFT1Q96AA3 541 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 PAG1Q9NWQ8 432 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 CACNG4Q9UBN1 327 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 PPP2R2CQ9Y2T4 447 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 CSNK1G3Q9Y6M4 447 aa3.67□□□□□ -1.82
LINC01040-201ENST00000425048 LOC105371242A0A075B767 164 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 A6NLC8 198 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 A8MXK9 166 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 EPHB6O15197 1021 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 SSX4O60224 188 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 CLEC3BP05452 202 aa3.66□□□□□ -1.82
LINC01040-201ENST00000425048 MELTFP08582 738 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms