RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 MMP13P45452 471 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 GABRB2P47870 512 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ARSFP54793 590 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 BPIFB4P59827 614 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 LRRC63Q05C16 580 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 STIM1Q13586 685 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 NFE2L1Q14494 772 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 MAPKAPK3Q16644 382 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 SLC5A12Q1EHB4 618 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 FLYWCH1Q4VC44 716 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 VWA3BQ502W6 1294 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 MARC1Q5VT66 337 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 NAA35Q5VZE5 725 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ATG9BQ674R7 924 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 KIAA0930Q6ICG6 404 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 CAPN12Q6ZSI9 719 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 NLRP9Q7RTR0 991 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 BNIPLQ7Z465 357 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 NOP9Q86U38 636 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 MARVELD2Q8N4S9 558 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 HORMAD2Q8N7B1 307 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 BEND7Q8N7W2 519 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 C19orf47Q8N9M1 422 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF592Q92610 1267 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 MIEF2Q96C03 454 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 PERPQ96FX8 193 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 RBM41Q96IZ5 413 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF599Q96NL3 588 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 FERD3LQ96RJ6 166 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 UTP23Q9BRU9 249 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 CRACR2AQ9BSW2 395 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 CNPY3Q9BT09 278 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 SELENOOQ9BVL4 669 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 C19orf24Q9BVV8 132 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 SARGQ9BW04 601 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 HES7Q9BYE0 225 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ZCCHC2Q9C0B9 1178 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 DHX35Q9H5Z1 703 aaKnown RBP6.05□□□□□ -1.44
SDCBP-203ENST00000424270 KIR3DX1Q9H7L2 352 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 NT5MQ9NPB1 228 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 RIC8BQ9NVN3 520 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 HAUS2Q9NVX0 235 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 RMND1Q9NWS8 449 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 DTLQ9NZJ0 730 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 CTSFQ9UBX1 484 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 C3orf18Q9UK00 162 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 CHKBQ9Y259 395 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ADGRG1Q9Y653 693 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 ALG6Q9Y672 507 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 MAU2Q9Y6X3 613 aa6.05□□□□□ -1.44
SDCBP-203ENST00000424270 RGSL1A5PLK6 1076 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 OR2AG2A6NM03 316 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 KCNJ13O60928 360 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 SUN1O94901 812 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 POLBP06746 335 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 CELA2AP08217 269 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 PNMA6AP0CW24 399 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ITGAMP11215 1152 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 KRT3P12035 628 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 PTGER1P34995 402 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 PRCPP42785 496 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 PTPN9P43378 593 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 SYKP43405 635 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 OR1D4P47884 311 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ZFP36L2P47974 494 aaKnown RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ST13P50502 369 aaKnown RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 DLX5P56178 289 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 NUP107P57740 925 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 KLC1Q07866 573 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 TMEM115Q12893 351 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 POU4F3Q15319 338 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 OR1C1Q15619 314 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 CHRFAM7AQ494W8 412 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 PPP6R3Q5H9R7 873 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 RALGPS1Q5JS13 557 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 FCRLBQ6BAA4 426 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ARHGEF18Q6ZSZ5 1173 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 GALNTL5Q7Z4T8 443 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 TRIM73Q86UV7 250 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 KRTAP1-3Q8IUG1 177 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ZNF547Q8IVP9 402 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 PGBD5Q8N414 524 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ATPAF2Q8N5M1 289 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 TRAM1L1Q8N609 369 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 TTC29Q8NA56 475 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 JOSD2Q8TAC2 188 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 FAM222BQ8WU58 562 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 TMEM125Q96AQ2 219 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 FRMD6Q96NE9 622 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 INSM2Q96T92 566 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-203ENST00000424270 SPSB2Q99619 263 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 MGME1Q9BQP7 344 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 MESP1Q9BRJ9 268 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 TRIM51Q9BSJ1 452 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 TUBGCP2Q9BSJ2 902 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 NUP85Q9BW27 656 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 YAE1D1Q9NRH1 226 aa6.04□□□□□ -1.44
SDCBP-203ENST00000424270 RAD18Q9NS91 495 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms