RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 ZIM2Q9NZV7 527 aa18.4■□□□□ 0.54
RBFOX1-204ENST00000422070 GIMAP2Q9UG22 337 aa18.4■□□□□ 0.54
RBFOX1-204ENST00000422070 SERGEFQ9UGK8 458 aa18.4■□□□□ 0.54
RBFOX1-204ENST00000422070 DNMT3AQ9Y6K1 912 aaPredicted RBP18.4■□□□□ 0.54
RBFOX1-204ENST00000422070 MGAT4DA6NG13 374 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 SLC28A1O00337 649 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 FBP2O00757 339 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 NRP2O60462 931 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 MRPS21P82921 87 aaKnown RBP18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 ZNF33BQ06732 778 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 RPA4Q13156 261 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 WSCD2Q2TBF2 565 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 C1orf146Q5VVC0 180 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 KIAA1211LQ6NV74 962 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 RIPOR1Q6ZS17 1223 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 C11orf96Q7Z7L8 435 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 HEATR4Q86WZ0 1026 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 PLA2G15Q8NCC3 412 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 OR9I1Q8NGQ6 314 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 ROPN1LQ96C74 230 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 MSANTD3Q96H12 275 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 MKRN2Q9H000 416 aaKnown RBP18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 PIAS3Q9Y6X2 628 aa18.39■□□□□ 0.53
RBFOX1-204ENST00000422070 A0A1W2PQF6 199 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 SERTM1A2A2V5 107 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 NPIPB8E9PQR5 432 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 RGS14O43566 566 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 ADAM23O75077 832 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 ULK1O75385 1050 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 RNASEH2AO75792 299 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 PCDH8O95206 1070 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 EGFP01133 1207 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 KRT6AP02538 564 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 DNTTP04053 509 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 KRT6BP04259 564 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 HOXB2P14652 356 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 GLULP15104 373 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 TRIM23P36406 574 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 KRT6CP48668 564 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 PFN3P60673 137 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 RPS21P63220 83 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 ABRAXAS2Q15018 415 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 RPS6KA2Q15349 733 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 MAP7D1Q3KQU3 841 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 PIGGQ5H8A4 983 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 NEK5Q6P3R8 708 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 SFRP1Q8N474 314 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 OXR1Q8N573 874 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 LILRA3Q8N6C8 439 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 JADE3Q92613 823 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 NPAS2Q99743 824 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 C1QTNF2Q9BXJ5 285 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 ACTR8Q9H981 624 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 STOX2Q9P2F5 926 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 NDUFAF1Q9Y375 327 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 RNF11Q9Y3C5 154 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 KCNE1BA0A087WTH5 132 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 POP7O75817 140 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 C1orf105O95561 183 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 PDHA2P29803 388 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 DIO3P55073 304 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 GRSF1Q12849 480 aaKnown RBP eCLIP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 ABRQ12979 859 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 MAD2L1Q13257 205 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 RCAN2Q14206 197 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 MMEL1Q495T6 779 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 TMEM259Q4ZIN3 620 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 C8orf82Q6P1X6 216 aaPredicted RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 BLOC1S3Q6QNY0 202 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 CHRDL2Q6WN34 429 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 FNDC5Q8NAU1 212 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 PCYOX1LQ8NBM8 494 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 OR56A3Q8NH54 315 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 STMN2Q93045 179 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 MRPL40Q9NQ50 206 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 FBXL12Q9NXK8 326 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 ASIC5Q9NY37 505 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 NOP53Q9NZM5 478 aaKnown RBP18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 FZD4Q9ULV1 537 aa18.38■□□□□ 0.53
RBFOX1-204ENST00000422070 DYTNA2CJ06 578 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 GRXCR2A6NFK2 248 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 C2CD4DB7Z1M9 353 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 MANBAO00462 879 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 MRASO14807 208 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 PSMG1O95456 288 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 PCSK2P16519 638 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 PBLDP30039 288 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 PON2Q15165 354 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 NR6A1Q15406 480 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 LIPJQ5W064 366 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 SCIMPQ6UWF3 145 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 UNC5DQ6UXZ4 953 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 GALNT13Q8IUC8 556 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 CFAP206Q8IYR0 622 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 PLCD3Q8N3E9 789 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 SNX31Q8N9S9 440 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 TP53I13Q8NBR0 393 aaPredicted RBP18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 PREBQ9HCU5 417 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 SLC52A3Q9NQ40 469 aa18.37■□□□□ 0.53
RBFOX1-204ENST00000422070 KLQ9UEF7 1012 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms