RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 RUVBL1Q9Y265 456 aaKnown RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 UNC13CQ8NB66 2214 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SMIM31A0A1B0GVY4 71 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 CNTN5O94779 1100 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SCTRP47872 440 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 CLDN10P78369 228 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 NFKB2Q00653 900 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 ZNF605Q86T29 641 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 RANBP3LQ86VV4 465 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 MR1Q95460 341 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 C5orf34Q96MH7 638 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PWWP2AQ96N64 755 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 MCCC2Q9HCC0 563 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SDHAF3Q9NRP4 125 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 HRASLS2Q9NWW9 162 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 EIF2B4Q9UI10 523 aaKnown RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 OAS1P00973 400 aaKnown RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 HEXBP07686 556 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 CLCN7P51798 805 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SIM2Q14190 667 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PLEKHS1Q5SXH7 462 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 CYP2R1Q6VVX0 501 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 NUDT13Q86X67 352 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 TMEM156Q8N614 296 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 XAGE5Q8WWM1 108 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 DNAJC9Q8WXX5 260 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 CMTM7Q96FZ5 175 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PSKH2Q96QS6 385 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 RACGAP1Q9H0H5 632 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 MYOFQ9NZM1 2061 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 MYL12BO14950 172 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 TMCC2O75069 709 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 MRPS21P82921 87 aaKnown RBP10.53□□□□□ -0.72
PTCH1-206ENST00000421141 CYP1B1Q16678 543 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 POMZP3Q6PJE2 187 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 ZNF730Q6ZMV8 503 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 P4HA3Q7Z4N8 544 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 STK32CQ86UX6 486 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 EBPLQ9BY08 206 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 SLC17A9Q9BYT1 436 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 DMTF1Q9Y222 760 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 MAP4K5Q9Y4K4 846 aa10.53□□□□□ -0.72
PTCH1-206ENST00000421141 PAPSS2O95340 614 aaPredicted RBP10.52□□□□□ -0.72
PTCH1-206ENST00000421141 BPGMP07738 259 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 BNIP2Q12982 314 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 SLBPQ14493 270 aaKnown RBP eCLIP10.52□□□□□ -0.72
PTCH1-206ENST00000421141 FASTKD3Q14CZ7 662 aaKnown RBP10.52□□□□□ -0.72
PTCH1-206ENST00000421141 NATD1Q8N6N6 113 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 KBTBD7Q8WVZ9 684 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 GLYATL1Q969I3 302 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 A0A0J9YVX5 310 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 A0A0J9YYE9 177 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 ETV3P41162 512 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 SP140Q13342 867 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 ZNF460Q14592 562 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 FAM214AQ32MH5 1076 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 EIPR1Q53HC9 387 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 GCNT6Q5T4J0 391 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 ADGRD1Q6QNK2 874 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 SLC30A8Q8IWU4 369 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 FAM98AQ8NCA5 519 aaKnown RBP10.52□□□□□ -0.72
PTCH1-206ENST00000421141 WDR36Q8NI36 951 aaKnown RBP10.52□□□□□ -0.72
PTCH1-206ENST00000421141 TPSD1Q9BZJ3 242 aa10.52□□□□□ -0.72
PTCH1-206ENST00000421141 SAMD4AQ9UPU9 718 aaKnown RBP10.52□□□□□ -0.72
PTCH1-206ENST00000421141 FAM20BO75063 409 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 COQ9O75208 318 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 KHKP50053 298 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TDGQ13569 410 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TTC9BQ8N6N2 239 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 KLHL6Q8WZ60 621 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 TBL1XR1Q9BZK7 514 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 ZC4H2Q9NQZ6 224 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 NLE1Q9NVX2 485 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PRAMEF26H0Y7S4 382 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PEX1O43933 1283 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 OR10H3O60404 316 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PRPS2P11908 318 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 ADRB3P13945 408 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 GKP32189 559 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 GSSP48637 474 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 NCBP2P52298 156 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PPM1JQ5JR12 505 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 ANKRD22Q5VYY1 191 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 GPRIN1Q7Z2K8 1008 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 MFSD6LQ8IWD5 586 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 ATOH1Q92858 354 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 HERPUD2Q9BSE4 406 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PRR23D1E9PI22 279 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 SAP18O00422 153 aaKnown RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 UBOX5O94941 541 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 AGR2O95994 175 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PRR23D2P0DMB1 279 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 SAGP10523 405 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PRG2P13727 222 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 HERVK_113P63132 956 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 PIK3C3Q8NEB9 887 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 ZNF354BQ96LW1 612 aa10.52□□□□□ -0.73
PTCH1-206ENST00000421141 RTP3Q9BQQ7 232 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms