RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 RNGTTO60942 597 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 PEX11AO75192 247 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 MYCLP1P12525 358 aaPredicted RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 PPIBP23284 216 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 CCR7P32248 378 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 GGT5P36269 586 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 BLKP51451 505 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 TRAP1Q12931 704 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 AGTRAPQ6RW13 159 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 CRTC3Q6UUV7 619 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 ZNF852Q6ZMS4 543 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 RINLQ6ZS11 566 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 C12orf40Q86WS4 652 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 TRIM48Q8IWZ4 208 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 OR4F6Q8NGB9 312 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 FAM129BQ96TA1 746 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 PHF7Q9BWX1 381 aaPredicted RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 CADM1Q9BY67 442 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 PDE10AQ9Y233 779 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 RUVBL1Q9Y265 456 aaKnown RBP8.2□□□□□ -1.1
USP54-203ENST00000418501 PRSS21Q9Y6M0 314 aa8.2□□□□□ -1.1
USP54-203ENST00000418501 PDZK1P1A8MUH7 402 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 MANBAO00462 879 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 ZNF217O75362 1048 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 CASP2P42575 452 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 CHIT1Q13231 466 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 NAE1Q13564 534 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 C11orf91Q3C1V1 193 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 C2orf27AQ580R0 203 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SGO1Q5FBB7 561 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 ANXA8L1Q5VT79 327 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SBSNQ6UWP8 590 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 MSANTD1Q6ZTZ1 278 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 TMEM151AQ8N4L1 468 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 POU5F2Q8N7G0 328 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 FAM13CQ8NE31 585 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 GIMAP7Q8NHV1 300 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SLC26A7Q8TE54 656 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SMPDL3AQ92484 453 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 CMTM7Q96FZ5 175 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SLC17A9Q9BYT1 436 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 BTRCQ9Y297 605 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 WBP11Q9Y2W2 641 aaKnown RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 KCNH1O95259 989 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 CTSLP07711 333 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 MTHFD2P13995 350 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 FCARP24071 287 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 GSTM2P28161 218 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 VHLP40337 213 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 HSPA13P48723 471 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 DGKEP52429 567 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 POLR2JP52435 117 aaKnown RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 SH3BP2P78314 561 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 GRIN2CQ14957 1233 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 AGERQ15109 404 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 HABP4Q5JVS0 413 aaKnown RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 SYVN1Q86TM6 617 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 THOC6Q86W42 341 aaKnown RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 ZSWIM9Q86XI8 627 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 FAM3CQ92520 227 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SLC22A18Q96BI1 424 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 RCN3Q96D15 328 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 RSPRY1Q96DX4 576 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SPDL1Q96EA4 605 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 S1PR5Q9H228 398 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 OSGEPL1Q9H4B0 414 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 DMTF1Q9Y222 760 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 RFXAPO00287 272 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 PSIP1O75475 530 aaKnown RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 JUPP14923 745 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 ACPPP15309 386 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 TSPAN8P19075 237 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 POU3F3P20264 500 aaPredicted RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 S100A3P33764 101 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 GSTM5P46439 218 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 MRPL19P49406 292 aaKnown RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 SEMG2Q02383 582 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 PRKCQQ04759 706 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 LRP8Q14114 963 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 AAK1Q2M2I8 961 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 CHSY3Q70JA7 882 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 HEATR4Q86WZ0 1026 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 DSELQ8IZU8 1212 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 TMEM132CQ8N3T6 1108 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 OR2T34Q8NGX1 318 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 GABRG3Q99928 467 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 DNAJC15Q9Y5T4 150 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 A0A1W2PP55 124 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 GFYI3L273 518 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 LINC01565O15544 149 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 TSPAN12O95859 305 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 ANXA11P50995 505 aaKnown RBP8.19□□□□□ -1.1
USP54-203ENST00000418501 SLC34A1Q06495 639 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 PTCHD3Q3KNS1 767 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 SPIN4Q56A73 249 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 FRG2Q64ET8 278 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 ARMC6Q6NXE6 501 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 TBC1D21Q8IYX1 336 aa8.19□□□□□ -1.1
USP54-203ENST00000418501 TRIML2Q8N7C3 387 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms