RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 LENG8Q96PV6 779 aaPredicted RBP11.74□□□□□ -0.53
PTPRF-205ENST00000414879 NPAS2Q99743 824 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 SMURF2Q9HAU4 748 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 RGS5O15539 181 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 HCRTO43612 131 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 MAFKO60675 156 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 NIPSNAP2O75323 286 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 CLDN7O95471 211 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 LAMP2P13473 410 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 HSD3B1P14060 373 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 HSD3B2P26439 372 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 HOXC13P31276 330 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A5P35504 534 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 PCYT1AP49585 367 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 GATMP50440 423 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 TRIM32Q13049 653 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 C2orf27AQ580R0 203 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 ENPP7Q6UWV6 458 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 C14orf80Q86SX3 495 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 C11orf74Q86VG3 221 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 AGAP11Q8TF27 550 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 ART5Q96L15 291 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 CYP2S1Q96SQ9 504 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 DUSP26Q9BV47 211 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 ANKHQ9HCJ1 492 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 IL1RAPQ9NPH3 570 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 RPRD1BQ9NQG5 326 aaKnown RBP11.74□□□□□ -0.53
PTPRF-205ENST00000414879 STMN3Q9NZ72 180 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 B4GALT6Q9UBX8 382 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 PCDHB11Q9Y5F2 797 aa11.74□□□□□ -0.53
PTPRF-205ENST00000414879 G3V2T6 193 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 H7C0S8 307 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 DGKEP52429 567 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 ZNF33BQ06732 778 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 ALFQ53S48 1182 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 MZT2AQ6P582 158 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 LINC00471Q8N535 108 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 SLC38A4Q969I6 547 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 RAB26Q9ULW5 256 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 CAB39Q9Y376 341 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-205ENST00000414879 WWP2O00308 870 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 SOCS7O14512 581 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 FABP3P05413 133 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 LBX1P52954 281 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 NFKB2Q00653 900 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 LMAN2Q12907 356 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 GPRC6AQ5T6X5 926 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 ARHGAP36Q6ZRI8 547 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 RANBP3LQ86VV4 465 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-205ENST00000414879 OXR1Q8N573 874 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 KBTBD8Q8NFY9 601 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 MOSPD2Q8NHP6 518 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 CENPNQ96H22 339 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-205ENST00000414879 CLPTM1LQ96KA5 538 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 NECTIN3Q9NQS3 549 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 COPS7AQ9UBW8 275 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 SUSD2Q9UGT4 822 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 EFCAB10A6NFE3 127 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 TMEM150CB9EJG8 249 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 ALPIP09923 528 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 SHMT2P34897 504 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 CST9Q5W186 159 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 CLEC6AQ6EIG7 209 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 MACC1Q6ZN28 852 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 TFGQ92734 400 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-205ENST00000414879 ISG20Q96AZ6 181 aaKnown RBP11.73□□□□□ -0.53
PTPRF-205ENST00000414879 NACC2Q96BF6 587 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 BTBD9Q96Q07 612 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 LRRC3Q9BY71 257 aa11.73□□□□□ -0.53
PTPRF-205ENST00000414879 CRNNQ9UBG3 495 aaPredicted RBP11.73□□□□□ -0.53
PTPRF-205ENST00000414879 PSMD11O00231 422 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 ZMPSTE24O75844 475 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 GJB5O95377 273 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 HSMCR30P0CW71 290 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CSNK2A2P19784 350 aaPredicted RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CPN2P22792 545 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 RPL5P46777 297 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 IDH2P48735 452 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 C1QTNF8P60827 252 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 BNC1Q01954 994 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 PTGES3Q15185 160 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CDKL4Q5MAI5 379 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 CAND1Q86VP6 1230 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 FITM2Q8N6M3 262 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 PLEKHG4BQ96PX9 1271 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 WBP11Q9Y2W2 641 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 EIF4E1BA6NMX2 242 aaKnown RBP11.72□□□□□ -0.53
PTPRF-205ENST00000414879 PCDH7O60245 1069 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A9O60656 530 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 GJA1P17302 382 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A6P19224 532 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 NT5EP21589 574 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A1P22309 533 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A4P22310 534 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 UGT1A3P35503 534 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 IGFALSP35858 605 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 GRIA1P42261 906 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 ABATP80404 500 aa11.72□□□□□ -0.53
PTPRF-205ENST00000414879 MRPS15P82914 257 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms