RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PTPN9P43378 593 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 SPINT3P49223 89 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 TPI1P60174 286 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 MAXP61244 160 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 PMP22Q01453 160 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 CACNG1Q06432 222 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 GALNT3Q14435 633 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 RPE65Q16518 533 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 NKAIN1Q4KMZ8 207 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 RALGPS1Q5JS13 557 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 TRIM65Q6PJ69 517 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 CEP128Q6ZU80 1094 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 CBLL1Q75N03 491 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 DOLPP1Q86YN1 238 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 CLYBLQ8N0X4 340 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 BBS5Q8N3I7 341 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 PGBD5Q8N414 524 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 LILRB4Q8NHJ6 448 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 JOSD2Q8TAC2 188 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 TMEM158Q8WZ71 300 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 ZNF599Q96NL3 588 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 UCN2Q96RP3 112 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 GPATCH1Q9BRR8 931 aaKnown RBP6.1□□□□□ -1.43
LINC00396-201ENST00000411690 SPATA16Q9BXB7 569 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 CEP41Q9BYV8 373 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 MRM3Q9HC36 420 aaKnown RBP6.1□□□□□ -1.43
LINC00396-201ENST00000411690 TXLNGQ9NUQ3 528 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 IMP3Q9NV31 184 aaKnown RBP6.1□□□□□ -1.43
LINC00396-201ENST00000411690 PKD2L2Q9NZM6 624 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 IL17CQ9P0M4 197 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 DHCR7Q9UBM7 475 aaKnown RBP6.1□□□□□ -1.43
LINC00396-201ENST00000411690 APEX2Q9UBZ4 518 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 POMT2Q9UKY4 750 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 PSMD13Q9UNM6 376 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 HS3ST3B1Q9Y662 390 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 NUP210LQ5VU65 1888 aa6.1□□□□□ -1.43
LINC00396-201ENST00000411690 IDSB3KWA1 339 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 LINC01387J3KSC0 135 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 MATN2O00339 956 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 FOXN3O00409 490 aaPredicted RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ADAM10O14672 748 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 DAPK3O43293 454 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 FZD6O60353 706 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 KCNJ13O60928 360 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 MTX2O75431 263 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CDK14O94921 469 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 PRAMEF1O95521 474 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 WDPCPO95876 746 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 RAF1P04049 648 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 HSP90AA1P07900 732 aaKnown RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 SPTBP11277 2137 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ST6GAL1P15907 406 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 SLC9A1P19634 815 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CMA1P23946 247 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CHRNB4P30926 498 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 HTR7P34969 479 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 BPIFB4P59827 614 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ALDH6A1Q02252 535 aaKnown RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 APBA1Q02410 837 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 XRCC4Q13426 336 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 OLIG2Q13516 323 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 KEAP1Q14145 624 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 RBBP7Q16576 425 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 COBLL1Q53SF7 1204 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ANKRD20A8PQ5CZ79 823 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ZNF569Q5MCW4 686 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ZNF658Q5TYW1 1059 aaPredicted RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 TTI2Q6NXR4 508 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 NAPRTQ6XQN6 538 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CDHR3Q6ZTQ4 885 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CDC20BQ86Y33 519 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ZNF547Q8IVP9 402 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ARHGAP12Q8IWW6 846 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 FAM20CQ8IXL6 584 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 KBTBD2Q8IY47 623 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 SIMC1Q8NDZ2 872 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 OR11G2Q8NGC1 345 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 OR4E2Q8NGC2 313 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CCHCR1Q8TD31 782 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 SLC20A1Q8WUM9 679 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CPA5Q8WXQ8 436 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 FOXD4L4Q8WXT5 416 aaPredicted RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 MGME1Q9BQP7 344 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CRACR2AQ9BSW2 395 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 NAA15Q9BXJ9 866 aaKnown RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 SPRTNQ9H040 489 aaPredicted RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 KLHL25Q9H0H3 589 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 ZNF160Q9HCG1 818 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 RASSF1Q9NS23 344 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 SAMSN1Q9NSI8 373 aaKnown RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 RMND1Q9NWS8 449 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 DTLQ9NZJ0 730 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 SLC24A2Q9UI40 661 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 FZD10Q9ULW2 581 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 HPSEQ9Y251 543 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CFAP20Q9Y6A4 193 aaKnown RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 HCFC1P51610 2035 aa6.09□□□□□ -1.43
LINC00396-201ENST00000411690 MAP1AP78559 2803 aaPredicted RBP6.09□□□□□ -1.43
LINC00396-201ENST00000411690 CNTRLQ7Z7A1 2325 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms