RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SHMT2P34897 504 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CARSP49589 748 aaKnown RBP30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CLCN7P51798 805 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 FRG1Q14331 258 aaKnown RBP30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ANKS6Q68DC2 871 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 LRRC69Q6ZNQ3 347 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 DCUN1D3Q8IWE4 304 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SPACA3Q8IXA5 215 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ZBED8Q8IZ13 594 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 GIMAP7Q8NHV1 300 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 KCNJ9Q92806 393 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 PPM1MQ96MI6 270 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SLC30A3Q99726 388 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 PPANQ9NQ55 473 aaKnown RBP30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 FBXO8Q9NRD0 319 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 TSR3Q9UJK0 312 aaKnown RBP30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 RUVBL2Q9Y230 463 aaKnown RBP30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 COMMD10Q9Y6G5 202 aa30.23■■■□□ 2.43
TRAF3IP1-203ENST00000409739 NELFEP18615 380 aaKnown RBP30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ITPKBP27987 946 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SH3BP2P78314 561 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 DCAF12Q5T6F0 453 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 TEDDM1Q5T9Z0 273 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 KIAA0408Q6ZU52 694 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SLC41A2Q96JW4 573 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CTRCQ99895 268 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 AARSD1Q9BTE6 412 aaKnown RBP30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 APMAPQ9HDC9 416 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 NFS1Q9Y697 457 aa30.22■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ANKRD12Q6UB98 2062 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 GABRB3P28472 473 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SLC7A5Q01650 507 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 TUBB2AQ13885 445 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 TRADDQ15628 312 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ACSBG2Q5FVE4 666 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 GALNT7Q86SF2 657 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ZFAND4Q86XD8 727 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SIDT2Q8NBJ9 832 aaKnown RBP30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 KIF18AQ8NI77 898 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SKA2Q8WVK7 121 aaPredicted RBP30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 LRRC1Q9BTT6 524 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 TUBB2BQ9BVA1 445 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ASPSCR1Q9BZE9 553 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 PCM1Q15154 2024 aa30.21■■■□□ 2.43
TRAF3IP1-203ENST00000409739 EIF3HO15372 352 aaKnown RBP eCLIP30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 KDM1AO60341 852 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CD82P27701 267 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 PLTPP55058 493 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CLN3Q13286 438 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 GRB7Q14451 532 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 KYNUQ16719 465 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 FBXO38Q6PIJ6 1188 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CEACAM20Q6UY09 585 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 KMT5CQ86Y97 462 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SPNS2Q8IVW8 549 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CARFQ8N187 725 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 FBXO25Q8TCJ0 367 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 HNRNPLLQ8WVV9 542 aaKnown RBP30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 NDNQ99608 321 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 GPR21Q99679 349 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 MENTQ9BUN1 341 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 DPH1Q9BZG8 443 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SAYSD1Q9NPB0 183 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 ACTR10Q9NZ32 417 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 KLHL42Q9P2K6 505 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 CIDEBQ9UHD4 219 aa30.2■■■□□ 2.43
TRAF3IP1-203ENST00000409739 SPTBP11277 2137 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 ITPR1Q14643 2758 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 C2orf74A8MZ97 194 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 PKLRP30613 574 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 ABCG1P45844 678 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 BDKRB1P46663 353 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 CAV1Q03135 178 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 TLE3Q04726 772 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 FOXM1Q08050 763 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 ZDHHC24Q6UX98 284 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 TEFMQ96QE5 360 aaKnown RBP30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 TWSG1Q9GZX9 223 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 OR6C2Q9NZP2 312 aa30.19■■■□□ 2.42
TRAF3IP1-203ENST00000409739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 POLR1CO15160 346 aaPredicted RBP30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 KLK10O43240 276 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 MATN4O95460 622 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 C1orf105O95561 183 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 AHSGP02765 367 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 CHRM5P08912 532 aaPredicted RBP30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 LIPCP11150 499 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 CDH3P22223 829 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 PRDX3P30048 256 aaKnown RBP30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 CUL1Q13616 776 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 KCNAB1Q14722 419 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 TTLL9Q3SXZ7 439 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 RBM20Q5T481 1227 aaKnown RBP30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 C19orf48Q6RUI8 117 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 MMGT1Q8N4V1 131 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 MNS1Q8NEH6 495 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 CD200R1Q8TD46 325 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 PYROXD1Q8WU10 500 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 FOPNLQ96NB1 174 aa30.18■■■□□ 2.42
TRAF3IP1-203ENST00000409739 OR6C1Q96RD1 312 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms