RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 MARK3P27448 753 aa2.56□□□□□ -2
CUL3-203ENST00000409096 B3GALT5-AS1P59052 145 aa2.56□□□□□ -2
CUL3-203ENST00000409096 ILF3Q12906 894 aaKnown RBP eCLIP2.56□□□□□ -23e-6■■■□□ 18.3
CUL3-203ENST00000409096 ITGA7Q13683 1181 aa2.56□□□□□ -2
CUL3-203ENST00000409096 SYT14P1Q58G82 188 aa2.56□□□□□ -2
CUL3-203ENST00000409096 ZRANB3Q5FWF4 1079 aa2.56□□□□□ -2
CUL3-203ENST00000409096 MDH1BQ5I0G3 518 aa2.56□□□□□ -2
CUL3-203ENST00000409096 MFSD12Q6NUT3 480 aa2.56□□□□□ -2
CUL3-203ENST00000409096 PLEKHM3Q6ZWE6 761 aa2.56□□□□□ -2
CUL3-203ENST00000409096 TMEM139Q8IV31 216 aa2.56□□□□□ -2
CUL3-203ENST00000409096 MFN1Q8IWA4 741 aa2.56□□□□□ -2
CUL3-203ENST00000409096 CPSF7Q8N684 471 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 LMNTD1Q8N9Z9 388 aa2.56□□□□□ -2
CUL3-203ENST00000409096 PAPD5Q8NDF8 572 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 NPEPL1Q8NDH3 523 aa2.56□□□□□ -2
CUL3-203ENST00000409096 SLC24A4Q8NFF2 622 aa2.56□□□□□ -2
CUL3-203ENST00000409096 DEPDC1BQ8WUY9 529 aa2.56□□□□□ -2
CUL3-203ENST00000409096 SSMEM1Q8WWF3 244 aa2.56□□□□□ -2
CUL3-203ENST00000409096 KCNE4Q8WWG9 221 aa2.56□□□□□ -2
CUL3-203ENST00000409096 ST6GALNAC6Q969X2 333 aa2.56□□□□□ -2
CUL3-203ENST00000409096 SPATA33Q96N06 139 aa2.56□□□□□ -2
CUL3-203ENST00000409096 ZNF583Q96ND8 569 aa2.56□□□□□ -2
CUL3-203ENST00000409096 FNBP1Q96RU3 617 aa2.56□□□□□ -2
CUL3-203ENST00000409096 PKP4Q99569 1192 aa2.56□□□□□ -2
CUL3-203ENST00000409096 VN1R1Q9GZP7 353 aa2.56□□□□□ -2
CUL3-203ENST00000409096 DNAJC4Q9NNZ3 241 aa2.56□□□□□ -2
CUL3-203ENST00000409096 SERINC1Q9NRX5 453 aa2.56□□□□□ -2
CUL3-203ENST00000409096 PCDHGB1Q9Y5G3 927 aa2.56□□□□□ -2
CUL3-203ENST00000409096 TNFRSF18Q9Y5U5 241 aa2.56□□□□□ -2
CUL3-203ENST00000409096 WDR81Q562E7 1941 aa2.56□□□□□ -2
CUL3-203ENST00000409096 XPNPEP2O43895 674 aa2.56□□□□□ -2
CUL3-203ENST00000409096 CTSVO60911 334 aa2.56□□□□□ -2
CUL3-203ENST00000409096 BAG4O95429 457 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 GBAP04062 536 aa2.56□□□□□ -2
CUL3-203ENST00000409096 H1F0P07305 194 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 HSPA8P11142 646 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 CD27P26842 260 aa2.56□□□□□ -2
CUL3-203ENST00000409096 MTHFRP42898 656 aa2.56□□□□□ -2
CUL3-203ENST00000409096 KCNJ4P48050 445 aa2.56□□□□□ -2
CUL3-203ENST00000409096 PTENP60484 403 aa2.56□□□□□ -2
CUL3-203ENST00000409096 NFE2L1Q14494 772 aa2.56□□□□□ -2
CUL3-203ENST00000409096 TCTE1Q5JU00 501 aa2.56□□□□□ -2
CUL3-203ENST00000409096 SPDYCQ5MJ68 293 aa2.56□□□□□ -2
CUL3-203ENST00000409096 FAM109BQ6ICB4 259 aaPredicted RBP2.56□□□□□ -2
CUL3-203ENST00000409096 CAPRIN2Q6IMN6 1127 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 DET1Q7L5Y6 550 aa2.56□□□□□ -2
CUL3-203ENST00000409096 TRIML1Q8N9V2 468 aa2.56□□□□□ -2
CUL3-203ENST00000409096 MR1Q95460 341 aa2.56□□□□□ -2
CUL3-203ENST00000409096 ATP6V1E2Q96A05 226 aa2.56□□□□□ -2
CUL3-203ENST00000409096 ALG14Q96F25 216 aa2.56□□□□□ -2
CUL3-203ENST00000409096 C17orf77Q96MU5 243 aa2.56□□□□□ -2
CUL3-203ENST00000409096 SEPHS2Q99611 448 aa2.56□□□□□ -2
CUL3-203ENST00000409096 THUMPD3Q9BV44 507 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 C6orf106Q9H6K1 298 aaPredicted RBP2.56□□□□□ -2
CUL3-203ENST00000409096 APOBEC3GQ9HC16 384 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 CD93Q9NPY3 652 aa2.56□□□□□ -2
CUL3-203ENST00000409096 COQ3Q9NZJ6 369 aa2.56□□□□□ -2
CUL3-203ENST00000409096 CPSF3Q9UKF6 684 aaKnown RBP2.56□□□□□ -2
CUL3-203ENST00000409096 ENO4A6NNW6 628 aa2.55□□□□□ -2
CUL3-203ENST00000409096 E9PI62 339 aa2.55□□□□□ -2
CUL3-203ENST00000409096 GAPDHSO14556 408 aaPredicted RBP2.55□□□□□ -2
CUL3-203ENST00000409096 SUPT20HL2P0C7V6 817 aa2.55□□□□□ -2
CUL3-203ENST00000409096 SNHG28P0DPA3 235 aa2.55□□□□□ -2
CUL3-203ENST00000409096 HAPLN1P10915 354 aaPredicted RBP2.55□□□□□ -2
CUL3-203ENST00000409096 EPHA2P29317 976 aa2.55□□□□□ -2
CUL3-203ENST00000409096 HOXC8P31273 242 aa2.55□□□□□ -2
CUL3-203ENST00000409096 LHX1P48742 406 aa2.55□□□□□ -2
CUL3-203ENST00000409096 CDH11P55287 796 aa2.55□□□□□ -2
CUL3-203ENST00000409096 FOXG1P55316 489 aaPredicted RBP2.55□□□□□ -2
CUL3-203ENST00000409096 CX3CL1P78423 397 aa2.55□□□□□ -2
CUL3-203ENST00000409096 MAT1AQ00266 395 aaKnown RBP2.55□□□□□ -2
CUL3-203ENST00000409096 MFAP5Q13361 173 aa2.55□□□□□ -2
CUL3-203ENST00000409096 CA9Q16790 459 aa2.55□□□□□ -2
CUL3-203ENST00000409096 KIF19Q2TAC6 998 aa2.55□□□□□ -2
CUL3-203ENST00000409096 PACS1Q6VY07 963 aa2.55□□□□□ -2
CUL3-203ENST00000409096 FOXP4Q8IVH2 680 aaPredicted RBP2.55□□□□□ -2
CUL3-203ENST00000409096 MUC20Q8N307 709 aaPredicted RBP2.55□□□□□ -2
CUL3-203ENST00000409096 MOSPD2Q8NHP6 518 aa2.55□□□□□ -2
CUL3-203ENST00000409096 OCC1Q8TAD7 63 aa2.55□□□□□ -2
CUL3-203ENST00000409096 ZNF473Q8WTR7 871 aaKnown RBP2.55□□□□□ -2
CUL3-203ENST00000409096 LYZL4Q96KX0 146 aa2.55□□□□□ -2
CUL3-203ENST00000409096 CCDC3Q9BQI4 270 aa2.55□□□□□ -2
CUL3-203ENST00000409096 BTBD10Q9BSF8 475 aa2.55□□□□□ -2
CUL3-203ENST00000409096 EVA1AQ9H8M9 152 aa2.55□□□□□ -2
CUL3-203ENST00000409096 ZWILCHQ9H900 591 aa2.55□□□□□ -2
CUL3-203ENST00000409096 LRWD1Q9UFC0 647 aa2.55□□□□□ -2
CUL3-203ENST00000409096 POLLQ9UGP5 575 aa2.55□□□□□ -2
CUL3-203ENST00000409096 GTF3C4Q9UKN8 822 aa2.55□□□□□ -2
CUL3-203ENST00000409096 GRIP1Q9Y3R0 1128 aa2.55□□□□□ -2
CUL3-203ENST00000409096 CAMTA1Q9Y6Y1 1673 aa2.55□□□□□ -2
CUL3-203ENST00000409096 NEMP2A6NFY4 417 aa2.55□□□□□ -2
CUL3-203ENST00000409096 SMTNL1A8MU46 457 aa2.55□□□□□ -2
CUL3-203ENST00000409096 INSIG1O15503 277 aa2.55□□□□□ -2
CUL3-203ENST00000409096 GSRP00390 522 aa2.55□□□□□ -2
CUL3-203ENST00000409096 IGHV2-70P01814 119 aa2.55□□□□□ -2
CUL3-203ENST00000409096 ZFYP08048 801 aaPredicted RBP2.55□□□□□ -2
CUL3-203ENST00000409096 T-ENOLP0DO92 83 aa2.55□□□□□ -2
CUL3-203ENST00000409096 EEF1A1P68104 462 aaKnown RBP2.55□□□□□ -2
CUL3-203ENST00000409096 DUOXA1Q1HG43 343 aa2.55□□□□□ -2
CUL3-203ENST00000409096 EEF1A1P5Q5VTE0 462 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms