RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 FAM227AF5H4B4 570 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 IFRD1O00458 451 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 GABRDO14764 452 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 PENKP01210 267 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 HIST1H2AGP0C0S8 130 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 UROSP10746 265 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 F5P12259 2224 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 HIST1H2ADP20671 130 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 XPAP23025 273 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 C21orf33P30042 268 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 CDKN2CP42773 168 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ADAM17P78536 824 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ATP6AP1Q15904 470 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ADNP2Q6IQ32 1131 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 CYS1Q717R9 158 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 OLIG3Q7RTU3 272 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 TMEM173Q86WV6 379 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 HID1Q8IV36 788 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 RGL4Q8IZJ4 473 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 BRSK1Q8TDC3 778 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ROPN1LQ96C74 230 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 HIST1H2AHQ96KK5 128 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 HIST1H2AJQ99878 128 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 H2AFJQ9BTM1 129 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 LRTM1Q9HBL6 345 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 EHD3Q9NZN3 535 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ABCG2Q9UNQ0 655 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 SLC22A14Q9Y267 594 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 TBC1D30Q9Y2I9 924 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 RAD51BO15315 384 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 PQBP1O60828 265 aaKnown RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 KERAO60938 352 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 NME6O75414 186 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 RASAL1O95294 804 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 FGF1P05230 155 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ALPPL2P10696 532 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 FCGR1AP12314 374 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 CD36P16671 472 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 RHOQP17081 205 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ADRA1AP35348 466 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 RFX3P48380 749 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 SLC11A2P49281 568 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ERVK-8P63133 956 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 PURAQ00577 322 aaKnown RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 TRAP1Q12931 704 aaKnown RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 SLC36A3Q495N2 470 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 TXNDC8Q6A555 127 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 Q6ZSR9 355 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 TICAM1Q8IUC6 712 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 LINC01465Q8N7H1 131 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 NT5C3BQ969T7 300 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 Q96MT0 163 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ATOH8Q96SQ7 321 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 COPS4Q9BT78 406 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ALOXE3Q9BYJ1 711 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 C11orf16Q9NQ32 467 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 CLEC4AQ9UMR7 237 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 DLGAP4Q9Y2H0 992 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 PCDHGA4Q9Y5G9 962 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 CSF2P04141 144 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 PGRP06401 933 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 GPIP06744 558 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 MMP2P08253 660 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 ATXN1LP0C7T5 689 aaKnown RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 ACPPP15309 386 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 TYMPP19971 482 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 HPCAL1P37235 193 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 FLT3LGP49771 235 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 RGS4P49798 205 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 PRKAG1P54619 331 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 HKDC1Q2TB90 917 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 BRMS1LQ5PSV4 323 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 C6orf141Q5SZD1 244 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 PRMT9Q6P2P2 845 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 ARL14EPQ8N8R7 260 aaPredicted RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 ANKFN1Q8N957 763 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 ZBTB8BQ8NAP8 495 aaPredicted RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 BTN2A3PQ96KV6 586 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 CSF3RQ99062 836 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 PHOX2BQ99453 314 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 LINC00597Q9H2U6 94 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 AIG1Q9NVV5 245 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 FAM118AQ9NWS6 357 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 PCTPQ9UKL6 214 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 GPR45Q9Y5Y3 372 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 CFAP20Q9Y6A4 193 aaKnown RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 AQP12BA6NM10 295 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 H3BN98 237 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 SMAD6O43541 496 aaKnown RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 ADAM23O75077 832 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 UGT2B4P06133 528 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 CKMT1AP12532 417 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 FDXRP22570 491 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 TCEA1P23193 301 aaKnown RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 MYF6P23409 242 aa8.15□□□□□ -1.1
SNX13-201ENST00000409076 CCND3P30281 292 aaPredicted RBP8.15□□□□□ -1.1
SNX13-201ENST00000409076 AXLP30530 894 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms