RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PSKH1P11801 424 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 PTPN2P17706 415 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 AGXTP21549 392 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 BRCC3P46736 316 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 CHIT1Q13231 466 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 FAM174BQ3ZCQ3 159 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 ALG10Q5BKT4 473 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 PRR23BQ6ZRT6 265 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 IQCHQ86VS3 1027 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 KCT2Q8NC54 265 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 DNAAF2Q9NVR5 837 aaKnown RBP11.85□□□□□ -0.51
SMCR8-201ENST00000406438 STOX2Q9P2F5 926 aaPredicted RBP11.85□□□□□ -0.51
SMCR8-201ENST00000406438 IL36AQ9UHA7 158 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 TCAF1Q9Y4C2 921 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 MATN3O15232 486 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 AGR2O95994 175 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 PRPS2P11908 318 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 MAGP20916 626 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 PTGER3P43115 390 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 NOMO1Q15155 1222 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 KLHL26Q53HC5 615 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 PPP2R2DQ66LE6 453 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
SMCR8-201ENST00000406438 LDB1Q86U70 411 aaPredicted RBP11.85□□□□□ -0.51
SMCR8-201ENST00000406438 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 GRPEL2Q8TAA5 225 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 C2orf15Q8WU43 125 aaKnown RBP11.85□□□□□ -0.51
SMCR8-201ENST00000406438 FCGR1BQ92637 280 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 THUMPD1Q9NXG2 353 aaKnown RBP11.85□□□□□ -0.51
SMCR8-201ENST00000406438 CIDEBQ9UHD4 219 aa11.85□□□□□ -0.51
SMCR8-201ENST00000406438 ILVBLA1L0T0 632 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ELOA3DA6NLF2 546 aaPredicted RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 H0YGN5 161 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 H3BUI4 141 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 FAM155BO75949 473 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 PRDX6P30041 224 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 MAT2AP31153 395 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 UGT1A3P35503 534 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 UGCGQ16739 394 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ELOA3BQ3SY89 546 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 PRAMEF17Q5VTA0 474 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 RFWD3Q6PCD5 774 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 IRF2BP2Q7Z5L9 587 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CAND1Q86VP6 1230 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ELOA3Q8NG57 546 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 NDRG1Q92597 394 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 DKK3Q9UBP4 350 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 C2orf71A6NGG8 1288 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CDH12P55289 794 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 MXD1Q05195 221 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 UBXN2BQ14CS0 331 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 PRKD1Q15139 912 aaPredicted RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 AMZ1Q400G9 498 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF554Q86TJ5 538 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 GHDCQ8N2G8 530 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 SNIP1Q8TAD8 396 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 AKAP1Q92667 903 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CENPNQ96H22 339 aaPredicted RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 C8orf48Q96LL4 319 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ACBD6Q9BR61 282 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 TRNAU1APQ9NX07 287 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 TREHO43280 583 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 EIF5AP63241 154 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 P2RY8Q86VZ1 359 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CPNE9Q8IYJ1 553 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CHRAC1Q9NRG0 131 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 TESMINQ9Y4I5 508 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 RGPD2P0DJD1 1756 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 A0A1W2PPM1 405 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 EOMESO95936 686 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 MTHFD1P11586 935 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 LRRC70Q7Z2Q7 622 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 TMCO6Q96DC7 493 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 C12orf66Q96MD2 445 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CCDC28BQ9BUN5 200 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 DHX33Q9H6R0 707 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 HCAR3P49019 387 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CLCN4P51793 760 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 CAP1Q01518 475 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 DSC2Q02487 901 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 KLF10Q13118 480 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 SLC1A5Q15758 541 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 LPCAT4Q643R3 524 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF627Q7L945 461 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ZDHHC21Q8IVQ6 265 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 PSKH2Q96QS6 385 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 B3GAT2Q9NPZ5 323 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 PADI3Q9ULW8 664 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 TNFP01375 233 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 NELFEP18615 380 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 SIM2Q14190 667 aaPredicted RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 INTS6LQ5JSJ4 861 aaKnown RBP11.84□□□□□ -0.51
SMCR8-201ENST00000406438 DENND1AQ8TEH3 1009 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 PCED1BQ96HM7 432 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 DPYSL5Q9BPU6 564 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 HEPHQ9BQS7 1158 aa11.84□□□□□ -0.51
SMCR8-201ENST00000406438 ZNF717Q9BY31 904 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms