RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 EBF2Q9HAK2 575 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 SERINC1Q9NRX5 453 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 DAPK2Q9UIK4 370 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 PCDHGB1Q9Y5G3 927 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 PCDH11YQ9BZA8 1340 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 TRIP12Q14669 1992 aaPredicted RBP3.65□□□□□ -1.82
HMGB1P17-201ENST00000403495 A0A1W2PPK0 400 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 MED19A0JLT2 244 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 A4D1N5 150 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 NEMP2A6NFY4 417 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 ENO4A6NNW6 628 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 E9PI62 339 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 INO80B-WBP1J3KQ70 363 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 CLDN4O14493 209 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 GAPDHSO14556 408 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 CTSVO60911 334 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 BAG4O95429 457 aaKnown RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZFYP08048 801 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 SUPT20HL2P0C7V6 817 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 SNHG28P0DPA3 235 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 HAPLN1P10915 354 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 DAOP14920 347 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCKBRP32239 447 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 IL15P40933 162 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 LHX1P48742 406 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 ART1P52961 327 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 MLLT10P55197 1068 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 CDH11P55287 796 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 GSDMDP57764 484 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 PTENP60484 403 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 RPS18P62269 152 aaKnown RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 CX3CL1P78423 397 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 MFAP5Q13361 173 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 TUBB2AQ13885 445 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 VEZF1Q14119 521 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 E2F5Q15329 346 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF324BQ6AW86 544 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 PRR27Q6MZM9 219 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 ABI3BPQ7Z7G0 1075 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 IQCA1Q86XH1 822 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 TMEM139Q8IV31 216 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 MUC20Q8N307 709 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 CIARTQ8N365 385 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 NPEPL1Q8NDH3 523 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 RDM1Q8NG50 284 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 VANGL1Q8TAA9 524 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 HEXDCQ8WVB3 486 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 CORO2AQ92828 525 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 MOB3AQ96BX8 217 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 THOC1Q96FV9 657 aaKnown RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 VMP1Q96GC9 406 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 C17orf77Q96MU5 243 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 BTBD10Q9BSF8 475 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 WACQ9BTA9 647 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 TUBB2BQ9BVA1 445 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 C6orf106Q9H6K1 298 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 APOBEC3GQ9HC16 384 aaKnown RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 XAB2Q9HCS7 855 aaKnown RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 DNAJC4Q9NNZ3 241 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 LRWD1Q9UFC0 647 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 RASAL2Q9UJF2 1139 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 JRKLQ9Y4A0 524 aa3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZFP37Q9Y6Q3 630 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P17-201ENST00000403495 A0A1W2PRB8 838 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 DVL1O14640 695 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 GSRP00390 522 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 IGHV2-70P01814 119 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 CSN3P07498 182 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 HSPA8P11142 646 aaKnown RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 GNAZP19086 355 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 MSH3P20585 1137 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 CD27P26842 260 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 CDC25CP30307 473 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 PTGER4P35408 488 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 FMO5P49326 533 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 B3GALT5-AS1P59052 145 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 EEF1A1P68104 462 aaKnown RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 MAT1AQ00266 395 aaKnown RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 RRS1Q15050 365 aaKnown RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 CA9Q16790 459 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 NHSL2Q5HYW2 709 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 SPDYCQ5MJ68 293 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 ELFN2Q5R3F8 820 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 EEF1A1P5Q5VTE0 462 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 FAM91A1Q658Y4 838 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 TMEM182Q6ZP80 229 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 SPATA21Q7Z572 469 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 FOXP4Q8IVH2 680 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCDC170Q8IYT3 715 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 SAMD14Q8IZD0 417 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 BMPERQ8N8U9 685 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 THAP8Q8NA92 274 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 KBTBD8Q8NFY9 601 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 OR13A1Q8NGR1 328 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 OCC1Q8TAD7 63 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF473Q8WTR7 871 aaKnown RBP3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 IRGQQ8WZA9 623 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 ALG14Q96F25 216 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 ABHD8Q96I13 439 aa3.64□□□□□ -1.83
HMGB1P17-201ENST00000403495 THOC3Q96J01 351 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms