RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CYP20A1Q6UW02 462 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 AMER2Q8N7J2 671 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 OR2T11Q8NH01 316 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 MYLPFQ96A32 169 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 UBXN10Q96LJ8 280 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 ABCG8Q9H221 673 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 ACOT13Q9NPJ3 140 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 SPEF1Q9Y4P9 236 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 SCN4AP35499 1836 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 MANSC4A6NHS7 340 aaPredicted RBP16.75■□□□□ 0.27
PTPRA-205ENST00000399903 hCG_2039718K7EN88 272 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 CD6P30203 668 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 ACOX1Q15067 660 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 KIAA0930Q6ICG6 404 aaPredicted RBP16.75■□□□□ 0.27
PTPRA-205ENST00000399903 IL27RAQ6UWB1 636 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 TRIM48Q8IWZ4 208 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 COLEC11Q9BWP8 271 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 BTBD2Q9BX70 525 aa16.75■□□□□ 0.27
PTPRA-205ENST00000399903 EXOSC4Q9NPD3 245 aaKnown RBP16.75■□□□□ 0.27
PTPRA-205ENST00000399903 KMOO15229 486 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 ALX3O95076 343 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 SERPINA1P01009 418 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 WARSP23381 471 aaKnown RBP16.74■□□□□ 0.27
PTPRA-205ENST00000399903 CD86P42081 329 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 FCGRTP55899 365 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 LCP2Q13094 533 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 XKR4Q5GH76 650 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 KANK2Q63ZY3 851 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 SDE2Q6IQ49 451 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 LRRTM3Q86VH5 581 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 CYP4Z1Q86W10 505 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 P3H2Q8IVL5 708 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 IL17RDQ8NFM7 739 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 OR6F1Q8NGZ6 308 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 PROKR1Q8TCW9 393 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 TP53INP1Q96A56 240 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 FYTTD1Q96QD9 318 aaKnown RBP16.74■□□□□ 0.27
PTPRA-205ENST00000399903 ZFP14Q9HCL3 533 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 CCDC177Q9NQR7 707 aaPredicted RBP16.74■□□□□ 0.27
PTPRA-205ENST00000399903 MPP6Q9NZW5 540 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 TEKT2Q9UIF3 430 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 ZMYM5Q9UJ78 669 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 ITM2BQ9Y287 266 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 PCDHGB6Q9Y5F9 930 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 ZSWIM8A7E2V4 1837 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 TYW5A2RUC4 315 aaKnown RBP16.74■□□□□ 0.27
PTPRA-205ENST00000399903 TSC22D2O75157 780 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 PTTG1O95997 202 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 CD1DP15813 335 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 PRSS36Q5K4E3 855 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 EFL1Q7Z2Z2 1120 aaKnown RBP16.74■□□□□ 0.27
PTPRA-205ENST00000399903 NECAB2Q7Z6G3 386 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 SYVN1Q86TM6 617 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 TOP6BLQ8N6T0 577 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 L3HYPDHQ96EM0 354 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 NDFIP2Q9NV92 336 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 SATB2Q9UPW6 733 aa16.74■□□□□ 0.27
PTPRA-205ENST00000399903 CDC7O00311 574 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 CXCR6O00574 342 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 DUSP11O75319 330 aaKnown RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 RHOBTB1O94844 696 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 ABCB1P08183 1280 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 GALK2Q01415 458 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 CDK10Q15131 360 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 CILP2Q8IUL8 1156 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 B3GALT6Q96L58 329 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 ZNF717Q9BY31 904 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 MMP28Q9H239 520 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 OR51E2Q9H255 320 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 MMP27Q9H306 513 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 RERGLQ9H628 205 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 RUBCNLQ9H714 662 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 TAS2R9Q9NYW1 312 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 KLHL20Q9Y2M5 609 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 PRG3Q9Y2Y8 225 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 PKP3Q9Y446 797 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 CTDSP2O14595 271 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 PSMD3O43242 534 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 B4GALT3O60512 393 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 CAPN1P07384 714 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 GGT1P19440 569 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 SNRPD2P62316 118 aaKnown RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 NATD1Q8N6N6 113 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 PHOX2BQ99453 314 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 IKZF5Q9H5V7 419 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 FBXW11Q9UKB1 542 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 A0A1W2PQ72 361 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 C12orf71A8MTZ7 269 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 BTN3A1O00481 513 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 NDST3O95803 873 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 MYCLP1P12525 358 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 GRIK1P39086 918 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 DAOAP59103 153 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 GALNT1Q10472 559 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 PTGR1Q14914 329 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 C6orf136Q5SQH8 315 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 Q6ZPB1 254 aaPredicted RBP16.73■□□□□ 0.27
PTPRA-205ENST00000399903 SCN4BQ8IWT1 228 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 SETD9Q8NE22 299 aa16.73■□□□□ 0.27
PTPRA-205ENST00000399903 OR10T2Q8NGX3 314 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms