RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 NXNL1Q96CM4 212 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 PRR11Q96HE9 360 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 WDR77Q9BQA1 342 aaPredicted RBP11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 BRF2Q9HAW0 419 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 CHRAC1Q9NRG0 131 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 ARHGEF33A8MVX0 844 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 HAT1O14929 419 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 RHOP08100 348 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 GP1BBP13224 206 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 RAB28P51157 221 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 CLCQ05315 142 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 CPNE9Q8IYJ1 553 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 CMTM8Q8IZV2 173 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 GHDCQ8N2G8 530 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 PNLDC1Q8NA58 520 aaKnown RBP11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 DCUN1D5Q9BTE7 237 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 EGFL7Q9UHF1 273 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 WASF3Q9UPY6 502 aa11.85□□□□□ -0.51
CACNA1C-213ENST00000399629 A0A087WXM4 84 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 A0A0U1RQF3 1178 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PRR5-ARHGAP8B1AHC4 643 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 UGT2B11O75310 529 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CPNE6O95741 557 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 DBTP11182 482 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CD47Q08722 323 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PON2Q15165 354 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 GPR68Q15743 365 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 GALNT5Q7Z7M9 940 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 RHBDD1Q8TEB9 315 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PYDC1Q8WXC3 89 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PDP1Q9P0J1 537 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 TAC3Q9UHF0 121 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CICQ96RK0 1608 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CIB4A0PJX0 185 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 DUXAA6NLW8 204 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 ENO4A6NNW6 628 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 LOC110117498-PIK3R3F6TDL0 507 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 ATP1B2P14415 290 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 OTX2P32243 289 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 SLBPQ14493 270 aaKnown RBP eCLIP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 IL23RQ5VWK5 629 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 BICRALQ6AI39 1079 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 RABEPKQ7Z6M1 372 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CEP97Q8IW35 865 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PIK3R3Q92569 461 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 FOXJ1Q92949 421 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 HIC2Q96JB3 615 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 YIPF4Q9BSR8 244 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 COL20A1Q9P218 1284 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PRORSD1PA6NEY8 169 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 C2orf74A8MZ97 194 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 ZNF879B4DU55 563 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CPNE3O75131 537 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 MECP2P51608 486 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 SAR1AQ9NR31 198 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 MLLT1Q03111 559 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PLP2Q04941 152 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 SPDYCQ5MJ68 293 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 ABRAXAS1Q6UWZ7 409 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 C12orf42Q96LP6 360 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 TGM7Q96PF1 710 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CYP2S1Q96SQ9 504 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 ENY2Q9NPA8 101 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 FARSBQ9NSD9 589 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 IFT80Q9P2H3 777 aaPredicted RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 RBM47A0AV96 593 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 AGPSO00116 658 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 ACOT7O00154 380 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PREPP48147 710 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 NRLP54845 237 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 ABCA11PQ4W5N1 156 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 FBXO48Q5FWF7 155 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 NIPAL1Q6NVV3 410 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 RNF19BQ6ZMZ0 732 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 DGLUCYQ7Z3D6 616 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 OR6N1Q8NGY5 312 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 IL21RQ9HBE5 538 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 CENPMQ9NSP4 180 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PLAGL1Q9UM63 463 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PLCL2Q9UPR0 1127 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 SORCS3Q9UPU3 1222 aa11.84□□□□□ -0.51
CACNA1C-213ENST00000399629 PGAM2P15259 253 aa11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 HOXB6P17509 224 aaKnown RBP11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 POLR2CP19387 275 aaPredicted RBP11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 BDKRB1P46663 353 aa11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 CPSF7Q8N684 471 aaKnown RBP11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 RFKQ969G6 155 aa11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 CHID1Q9BWS9 393 aa11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 ARHGAP39Q9C0H5 1083 aa11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 OR51V1Q9H2C8 321 aa11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 Q9N2J8 555 aa11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 EIF2B4Q9UI10 523 aaKnown RBP11.83□□□□□ -0.51
CACNA1C-213ENST00000399629 ILVBLA1L0T0 632 aa11.83□□□□□ -0.52
CACNA1C-213ENST00000399629 ANXA2P2A6NMY6 339 aa11.83□□□□□ -0.52
CACNA1C-213ENST00000399629 TTC34A8MYJ7 566 aa11.83□□□□□ -0.52
CACNA1C-213ENST00000399629 PRAMEF12O95522 483 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms