RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 IGSF8Q969P0 613 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 ZNF486Q96H40 463 aaPredicted RBP13.71□□□□□ -0.21
APOB-202ENST00000399256 POLR1EQ9GZS1 481 aaKnown RBP13.71□□□□□ -0.21
APOB-202ENST00000399256 PRDM5Q9NQX1 630 aaPredicted RBP13.71□□□□□ -0.21
APOB-202ENST00000399256 OPTCQ9UBM4 332 aa13.71□□□□□ -0.21
APOB-202ENST00000399256 FFAR3O14843 346 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 GPR42O15529 346 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 NDUFB5O43674 189 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 TSPAN3O60637 253 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 VPS26AO75436 327 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 DIRAS1O95057 198 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 NTRK1P04629 796 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 JUNDP17535 347 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ZNF235Q14590 738 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 MS4A13Q5J8X5 152 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 DESI1Q6ICB0 168 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 AHSA2Q719I0 299 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 PRSS48Q7RTY5 328 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 GOLGA7Q7Z5G4 137 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 GPR149Q86SP6 731 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 SCN4BQ8IWT1 228 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 GPBP1L1Q9HC44 474 aaPredicted RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 TMEM45AQ9NWC5 275 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 IL37Q9NZH6 218 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ANKRD36A6QL64 1941 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 COL4A4P53420 1690 aaPredicted RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 IQCF5A8MTL0 148 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 MYCLP1P12525 358 aaPredicted RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 EPHA2P29317 976 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 DAPP51397 102 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 IL2P60568 153 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 COPZ1P61923 177 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 PHC1P78364 1004 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 RAP1GAP2Q684P5 730 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 LACC1Q8IV20 430 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ZDHHC21Q8IVQ6 265 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 PIANPQ8IYJ0 282 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 TMEM248Q9NWD8 314 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 IFRD1O00458 451 aaPredicted RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 OR7A17O14581 309 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 B3GAT3O94766 335 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ZNF682O95780 498 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 S100BP04271 92 aaPredicted RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 DBTP11182 482 aaKnown RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 ODC1P11926 461 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 KRT20P35900 424 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 CASP3P42574 277 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 NEK2P51955 445 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 HMGCS1Q01581 520 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 TRAF3Q13114 568 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 MFSD10Q14728 455 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 NDUFA5Q16718 116 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ZNF404Q494X3 552 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 SGO1Q5FBB7 561 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ZC3H12BQ5HYM0 836 aaKnown RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 CPZQ66K79 652 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 PSAPL1Q6NUJ1 521 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 FKBP9P1Q75LS8 142 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 METTL23Q86XA0 190 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 SYTL1Q8IYJ3 562 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ZNF683Q8IZ20 524 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 SERPINB11Q96P15 392 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ACBD6Q9BR61 282 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 DPY30Q9C005 99 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 ABCG2Q9UNQ0 655 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 CAB39Q9Y376 341 aaPredicted RBP13.7□□□□□ -0.22
APOB-202ENST00000399256 TESMINQ9Y4I5 508 aa13.7□□□□□ -0.22
APOB-202ENST00000399256 TRIP12Q14669 1992 aaPredicted RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 RAD51BO15315 384 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 PGLSO95336 258 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 HMBSP08397 361 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 OR4Q2P0C623 313 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 PKMP14618 531 aaKnown RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 CRYBB1P53674 252 aaPredicted RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 RUNDC3AQ59EK9 446 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 CTSL3PQ5NE16 218 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.69□□□□□ -0.22
APOB-202ENST00000399256 RGMBQ6NW40 437 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 SHQ1Q6PI26 577 aaKnown RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 NEK10Q6ZWH5 1172 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 MMAAQ8IVH4 418 aaKnown RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 LIX1Q8N485 282 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 CD200R1Q8TD46 325 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 RMDN1Q96DB5 314 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 PARK7Q99497 189 aaKnown RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 MARCH7Q9H992 704 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 FARSBQ9NSD9 589 aaKnown RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 NLE1Q9NVX2 485 aaPredicted RBP13.69□□□□□ -0.22
APOB-202ENST00000399256 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.22
APOB-202ENST00000399256 ISPDA4D126 451 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 ARL5CA6NH57 179 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 RAMP2O60895 175 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 PGRP06401 933 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 PTPN2P17706 415 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 NRIP1P48552 1158 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 TRPC1P48995 793 aa13.69□□□□□ -0.22
APOB-202ENST00000399256 ZNF140P52738 457 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms