RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 IL26Q9NPH9 171 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 TXLNGQ9NUQ3 528 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 PTGFRNQ9P2B2 879 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 COLEC10Q9Y6Z7 277 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 CUBNO60494 3623 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 SYCE3A1L190 88 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 GAPDHSO14556 408 aaPredicted RBP13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 MAP3K7O43318 606 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 SGTAO43765 313 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 MFSD11O43934 449 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 PRAMEF1O95521 474 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 HOXD4P09016 255 aaPredicted RBP13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 FDXRP22570 491 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 CCNCP24863 283 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 PCK1P35558 622 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 KLK7P49862 253 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 ATP13A4Q4VNC1 1196 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 KRTCAP3Q53RY4 240 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 ACAD10Q6JQN1 1059 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 DOLPP1Q86YN1 238 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 SIAH3Q8IW03 269 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 KBTBD2Q8IY47 623 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 CNTD1Q8N815 330 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 AGAP11Q8TF27 550 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF653Q96CK0 615 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 LINC00615Q96LM1 132 aaPredicted RBP13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF559Q9BR84 538 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 SYT11Q9BT88 431 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 GRPEL1Q9HAV7 217 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 PCDH18Q9HCL0 1135 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 TAS2R14Q9NYV8 317 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 ACTR10Q9NZ32 417 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 CTSFQ9UBX1 484 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 SPO11Q9Y5K1 396 aa13.11□□□□□ -0.31
VCPKMT-201ENST00000395859 C2orf74A8MZ97 194 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 PROM1O43490 865 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 RNF8O76064 485 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TOXO94900 526 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 MT-CYBP00156 380 aaPredicted RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 F10P00742 488 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 HEXAP06865 529 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 COX6A1P12074 109 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 HMGCLP35914 325 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 RBBP7Q16576 425 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 CT47A1Q5JQC4 288 aaPredicted RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 LDLRAP1Q5SW96 308 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 GPRC6AQ5T6X5 926 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TIGD7Q6NT04 549 aaPredicted RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 SASS6Q6UVJ0 657 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TRIM73Q86UV7 250 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 OR52E1Q8NGJ3 308 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 GDAP1Q8TB36 358 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 FAM71BQ8TC56 605 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 MBD6Q96DN6 1003 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TTC25Q96NG3 672 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 AGPAT1Q99943 283 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 ZCCHC2Q9C0B9 1178 aaKnown RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 NAT10Q9H0A0 1025 aaKnown RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 SOX17Q9H6I2 414 aaPredicted RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 FANCLQ9NW38 375 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 NXT1Q9UKK6 140 aaKnown RBP13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 TTLL3Q9Y4R7 772 aa13.1□□□□□ -0.31
VCPKMT-201ENST00000395859 A0A1B0GX78 115 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 KLHL33A6NCF5 533 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 ASPDHA6ND91 283 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 UGT1A9O60656 530 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 CTAG2O75638 210 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 BMP10O95393 424 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 SLC4A1P02730 911 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 SERPINA7P05543 415 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 SLC35G4P0C7Q5 338 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 RARAP10276 462 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 UGT1A6P19224 532 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 UGT1A1P22309 533 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 PBLDP30039 288 aaPredicted RBP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 DEKP35659 375 aaKnown RBP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 MEOX1P50221 254 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF658BQ4V348 819 aaPredicted RBP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 BOLA3Q53S33 107 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 CES4AQ5XG92 561 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 NCBP2-AS2Q69YL0 99 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 HIBCHQ6NVY1 386 aaPredicted RBP13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 SHISA6Q6ZSJ9 500 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 FGD2Q7Z6J4 655 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 MARVELD2Q8N4S9 558 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 SIRT6Q8N6T7 355 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 MLKLQ8NB16 471 aa13.09□□□□□ -0.31
VCPKMT-201ENST00000395859 WFDC11Q8NEX6 87 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms