RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 IGFL3Q6UXB1 125 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 UNC5AQ6ZN44 842 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 ARHGEF18Q6ZSZ5 1173 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 TAS2R42Q7RTR8 314 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 HOOK3Q86VS8 718 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 PIANPQ8IYJ0 282 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 RNF214Q8ND24 703 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 OR5K2Q8NHB8 316 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 ALG3Q92685 438 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 N4BP2L2Q92802 583 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 OR2A14Q96R47 310 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 PANX2Q96RD6 677 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 HGH1Q9BTY7 390 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 SRPK3Q9UPE1 567 aa16.9■□□□□ 0.3
SNRPA1-202ENST00000394082 RCCD1A6NED2 376 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 GOLGA6L9A6NEM1 432 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 TCP11X1B4DZS4 312 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 F8W8V4 182 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 CCL22O00626 93 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 OR2B3O76000 313 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 IPO7O95373 1038 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 AP2A1O95782 977 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 PVRP15151 417 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 UGT2B7P16662 529 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 ATP1A4Q13733 1029 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 TLDC1Q6P9B6 456 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 MRGPREQ86SM8 312 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 LRRC57Q8N9N7 239 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 OR2Y1Q8NGV0 311 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 FLVCR1-AS1Q8TAF5 88 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 GBP5Q96PP8 586 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 AP1M1Q9BXS5 423 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 XKR8Q9H6D3 395 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 FAM60AQ9NP50 221 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 ASF1AQ9Y294 204 aa16.89■□□□□ 0.29
SNRPA1-202ENST00000394082 A0A0J9YY10 115 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 SLC5A10A0PJK1 596 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 DDX3YO15523 660 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 IPO13O94829 963 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 METTL18O95568 372 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 ALPPP05187 535 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 CHRM5P08912 532 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 DCDP81605 110 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 MYBPC3Q14896 1274 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 KIR2DS3Q14952 304 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 SLC5A12Q1EHB4 618 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 DCAF10Q5QP82 559 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 FAM69BQ5VUD6 431 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 LYPLAL1Q5VWZ2 237 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 LINC00523Q86TU6 105 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 CLEC1AQ8NC01 280 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 OR5AR1Q8NGP9 310 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 ALS2CR12Q96Q35 445 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 NRTNQ99748 197 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 FAM118BQ9BPY3 351 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 ENAMQ9NRM1 1142 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 RIMKLBQ9ULI2 386 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 B3GNT3Q9Y2A9 372 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 DUSP10Q9Y6W6 482 aa16.88■□□□□ 0.29
SNRPA1-202ENST00000394082 PCSK5Q92824 1860 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 WIPF3A6NGB9 483 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 ERI2A8K979 691 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 BHMG1C9JSJ3 638 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 PEX12O00623 359 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 ZSCAN9O15535 394 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 SEMA7AO75326 666 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 OR56A5P0C7T3 313 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 MSNP26038 577 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 KLF1Q13351 362 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 POU6F1Q14863 301 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 ZIC1Q15915 447 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 MRPL14Q6P1L8 145 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 LURAP1LQ8IV03 231 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 IQCKQ8N0W5 287 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 DNAJC22Q8N4W6 341 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 FAM71DQ8N9W8 422 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 DENND1AQ8TEH3 1009 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 ELMO1Q92556 727 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 PTERQ96BW5 349 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 TTC1Q99614 292 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 KLHL25Q9H0H3 589 aa16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 GPN3Q9UHW5 284 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-202ENST00000394082 FER1L5A0AVI2 2057 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 A6NL46 340 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 MIF4GDA9UHW6 222 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 ONECUT2O95948 504 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 PRSS56P0CW18 603 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 TPBGLP0DKB5 382 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 CBSLP0DN79 551 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 TPH1P17752 444 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 OTX2P32243 289 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 FOXN2P32314 431 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 CBSP35520 551 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 FOLR3P41439 243 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 NAP1L1P55209 391 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 DNAJC21Q5F1R6 531 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 MLIPQ5VWP3 458 aa16.86■□□□□ 0.29
SNRPA1-202ENST00000394082 AADACL2Q6P093 401 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms