RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 IFRD1O00458 451 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-202ENST00000393773 PEX12O00623 359 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 CCL22O00626 93 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 ZSCAN9O15535 394 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-202ENST00000393773 SPOPO43791 374 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 KLHL41O60662 606 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 ITGALP20701 1170 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 GCGRP47871 477 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 MARCKSL1P49006 195 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 DCDP81605 110 aaKnown RBP14.83□□□□□ -0.04
CHMP3-202ENST00000393773 PRKG2Q13237 762 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 TCEAL1Q15170 157 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 ZADH2Q8N4Q0 377 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 PPP4R1Q8TF05 950 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 C19orf43Q9BQ61 176 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 WDR77Q9BQA1 342 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-202ENST00000393773 SPRTNQ9H040 489 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-202ENST00000393773 GOLPH3Q9H4A6 298 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 C10orf88Q9H8K7 445 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 IFT80Q9P2H3 777 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-202ENST00000393773 NDOR1Q9UHB4 597 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 GPN3Q9UHW5 284 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-202ENST00000393773 SRPK3Q9UPE1 567 aa14.83□□□□□ -0.04
CHMP3-202ENST00000393773 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.83□□□□□ -0.045e-7■□□□□ 8.3
CHMP3-202ENST00000393773 AGPSO00116 658 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 ALOX12BO75342 701 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 ANXA9O76027 345 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 TPBGLP0DKB5 382 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 ITGAXP20702 1163 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 ACRV1P26436 265 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 PSMB4P28070 264 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 RBL1P28749 1068 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 CDKN1CP49918 316 aaPredicted RBP14.82□□□□□ -0.04
CHMP3-202ENST00000393773 TMPRSS15P98073 1019 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 RPA4Q13156 261 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 NKAIN1Q4KMZ8 207 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 KATNAL2Q8IYT4 538 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 SLC34A3Q8N130 599 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 OR8K1Q8NGG5 319 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 OR5AR1Q8NGP9 310 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 HEXDCQ8WVB3 486 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 TFGQ92734 400 aaPredicted RBP14.82□□□□□ -0.04
CHMP3-202ENST00000393773 N4BP2L2Q92802 583 aaPredicted RBP14.82□□□□□ -0.04
CHMP3-202ENST00000393773 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.82□□□□□ -0.04
CHMP3-202ENST00000393773 CHP1Q99653 195 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 AP1M1Q9BXS5 423 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 SLC22A11Q9NSA0 550 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 ABHD10Q9NUJ1 306 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 SPHK1Q9NYA1 384 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 ZDHHC3Q9NYG2 299 aa14.82□□□□□ -0.04
CHMP3-202ENST00000393773 C2CD3Q4AC94 2353 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 A0A0J9YY10 115 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 SYCE3A1L190 88 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 CRTAMO95727 393 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 CHRM5P08912 532 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-202ENST00000393773 CD63P08962 238 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 PRSS56P0CW18 603 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 PRF1P14222 555 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 PEBP1P30086 187 aaKnown RBP14.81□□□□□ -0.04
CHMP3-202ENST00000393773 MC4RP32245 332 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 SHMT2P34897 504 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 TSFMP43897 325 aaKnown RBP14.81□□□□□ -0.04
CHMP3-202ENST00000393773 GLRBP48167 497 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 AIMP2Q13155 320 aaKnown RBP14.81□□□□□ -0.04
CHMP3-202ENST00000393773 HIF1AQ16665 826 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 CYP2A13Q16696 494 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 GPR33Q49SQ1 333 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 ITPRIPL1Q6GPH6 555 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 DENND5AQ6IQ26 1287 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 IGFL2Q6UWQ7 119 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 UNC5AQ6ZN44 842 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 BBS12Q6ZW61 710 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 KCNMB4Q86W47 210 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 SRRM1Q8IYB3 904 aaKnown RBP14.81□□□□□ -0.04
CHMP3-202ENST00000393773 ZNF655Q8N720 491 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-202ENST00000393773 PTERQ96BW5 349 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 VPS37BQ9H9H4 285 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 SLC6A20Q9NP91 592 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 AGPAT4Q9NRZ5 378 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 TXLNGQ9NUQ3 528 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 FBXL4Q9UKA2 621 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 F8P00451 2351 aa14.81□□□□□ -0.04
CHMP3-202ENST00000393773 APOC4-APOC2K7ER74 178 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 SOCS6O14544 535 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 APOC2P02655 101 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 ANP32AP39687 249 aaKnown RBP14.8□□□□□ -0.04
CHMP3-202ENST00000393773 HADHBP55084 474 aaKnown RBP14.8□□□□□ -0.04
CHMP3-202ENST00000393773 TRIM14Q14142 442 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 ZRSR2Q15696 482 aaKnown RBP14.8□□□□□ -0.04
CHMP3-202ENST00000393773 PRAMEF13Q5VWM6 474 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 TLDC1Q6P9B6 456 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 SERPINA9Q86WD7 417 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 DNAJC22Q8N4W6 341 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 CLDN19Q8N6F1 224 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 MARVELD3Q96A59 401 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 FKBP10Q96AY3 582 aa14.8□□□□□ -0.04
CHMP3-202ENST00000393773 DNAJC1Q96KC8 554 aaKnown RBP14.8□□□□□ -0.04
CHMP3-202ENST00000393773 NHEJ1Q9H9Q4 299 aaPredicted RBP14.8□□□□□ -0.04
CHMP3-202ENST00000393773 ATP13A2Q9NQ11 1180 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms