RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 CLDN7O95471 211 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 H6PDO95479 791 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 PRAMEF12O95522 483 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 LDLRP01130 860 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 INTS11Q5TA45 600 aaKnown RBP9.46□□□□□ -0.9
COL6A3-204ENST00000392003 SULT1C3Q6IMI6 304 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 CYP20A1Q6UW02 462 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 ZFAND4Q86XD8 727 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 KREMEN2Q8NCW0 462 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 SLC22A12Q96S37 553 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 EMILIN2Q9BXX0 1053 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 LRRC3Q9BY71 257 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 SLC2A11Q9BYW1 496 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 TRIM8Q9BZR9 551 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 ASAH2Q9NR71 780 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 POLR3HQ9Y535 204 aaPredicted RBP9.46□□□□□ -0.9
COL6A3-204ENST00000392003 OR51B4Q9Y5P0 310 aa9.46□□□□□ -0.9
COL6A3-204ENST00000392003 BRCA2P51587 3418 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 A0A1W2PRU2 124 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 FAM149AA5PLN7 773 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 GRXCR2A6NFK2 248 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SLC28A1O00337 649 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 GSTA4O15217 222 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 CCL16O15467 120 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 GLUD1P00367 558 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 MTHFD1P11586 935 aaKnown RBP9.45□□□□□ -0.9
COL6A3-204ENST00000392003 UGT1A6P19224 532 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 UGT1A1P22309 533 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 UGT1A4P22310 534 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 AKT1P31749 480 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 CTNNB1P35222 781 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 UGT1A3P35503 534 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 UGT1A5P35504 534 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 HTR6P50406 440 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SNRPD1P62314 119 aaKnown RBP9.45□□□□□ -0.9
COL6A3-204ENST00000392003 CHRNA6Q15825 494 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 CACHD1Q5VU97 1274 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 PLPP4Q5VZY2 271 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 NANOGP8Q6NSW7 305 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SBSNQ6UWP8 590 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SFRP1Q8N474 314 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 CLDN19Q8N6F1 224 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 PDPRQ8NCN5 879 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 OR7G1Q8NGA0 311 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 TEX37Q96LM6 180 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 HBEGFQ99075 208 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 PIF1Q9H611 641 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 NSUN3Q9H649 340 aaKnown RBP9.45□□□□□ -0.9
COL6A3-204ENST00000392003 NANOGQ9H9S0 305 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 HEBP1Q9NRV9 189 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 TBCCD1Q9NVR7 557 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 MAGEL2Q9UJ55 1249 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 DMTF1Q9Y222 760 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 OARD1Q9Y530 152 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 ASB1Q9Y576 335 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SOCS2O14508 198 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SMAD6O43541 496 aaKnown RBP9.45□□□□□ -0.9
COL6A3-204ENST00000392003 TGM5O43548 720 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 PAHP00439 452 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 NCK1P16333 377 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 ALAS2P22557 587 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 HNF1BP35680 557 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 PIK3CGP48736 1102 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 CDONQ4KMG0 1287 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SGO1Q5FBB7 561 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 TTC33Q6PID6 262 aaPredicted RBP9.45□□□□□ -0.9
COL6A3-204ENST00000392003 B3GNT6Q6ZMB0 384 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 Q6ZSR9 355 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 ADGRG5Q8IZF4 528 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 WFDC5Q8TCV5 224 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 TMEM74Q96NL1 305 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 HTATIP2Q9BUP3 242 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 BOCQ9BWV1 1114 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 DPY30Q9C005 99 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 CRISPLD2Q9H0B8 497 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 TNKS2Q9H2K2 1166 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 IL26Q9NPH9 171 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 SACM1LQ9NTJ5 587 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 KLQ9UEF7 1012 aa9.45□□□□□ -0.9
COL6A3-204ENST00000392003 FAF1Q9UNN5 650 aaPredicted RBP9.45□□□□□ -0.9
COL6A3-204ENST00000392003 MYOCOSA0A1B0GUC4 107 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 ULK1O75385 1050 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 FUCA1P04066 466 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 G6PDP11413 515 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 EPB42P16452 691 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 MSH3P20585 1137 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 ACRV1P26436 265 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 HTR1EP28566 365 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 CSNK1DP48730 415 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 ESRRGP62508 458 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 RPL38P63173 70 aaKnown RBP9.44□□□□□ -0.9
COL6A3-204ENST00000392003 ARHGEF7Q14155 803 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 C18orf21Q32NC0 220 aaPredicted RBP9.44□□□□□ -0.9
COL6A3-204ENST00000392003 CCDC58Q4VC31 144 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 HS6ST3Q8IZP7 471 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 FAM47BQ8NA70 645 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 PROKR1Q8TCW9 393 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 HCAR2Q8TDS4 363 aa9.44□□□□□ -0.9
COL6A3-204ENST00000392003 SKA2Q8WVK7 121 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms