RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 WEE1P30291 646 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 FEN1P39748 380 aaKnown RBP12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 RFX3P48380 749 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 STC1P52823 247 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 TUSC3Q13454 348 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 DDI2Q5TDH0 399 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 Q6ZNX1 250 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 GPR142Q7Z601 462 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 SERPINA9Q86WD7 417 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 CACTIN-AS1Q8N1I8 211 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 MFSD2AQ8NA29 543 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 TBC1D15Q8TC07 691 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 IPCEF1Q8WWN9 437 aaPredicted RBP12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 PIK3R3Q92569 461 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 PYURFQ96I23 114 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 TEPSINQ96N21 525 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.35
TRAPPC9-201ENST00000389328 PIRO00625 290 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 NR2F6P10588 404 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 HOXB6P17509 224 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 GPX3P22352 226 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 CD83Q01151 205 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR4F3Q6IEY1 312 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 FBXL22Q6P050 247 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZFP90Q8TF47 636 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 SLC16A10Q8TF71 515 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 FCGR1BQ92637 280 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMCO6Q96DC7 493 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZFYVE1Q9HBF4 777 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 NEK6Q9HC98 313 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 LYVE1Q9Y5Y7 322 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 TIE1P35590 1138 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 APOFQ13790 326 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ITIH5Q86UX2 942 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ELMOD1Q8N336 334 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ZBTB2Q8N680 514 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 CLDN19Q8N6F1 224 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 VANGL1Q8TAA9 524 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 CAMKK2Q96RR4 588 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 CAPN10Q9HC96 672 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 C11orf16Q9NQ32 467 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 C14orf119Q9NWQ9 140 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 PCDHB1Q9Y5F3 818 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 COL14A1Q05707 1796 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 IGKV6-21A0A0C4DH24 114 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 H7C4K7 107 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 CLIC1O00299 241 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 MITFO75030 526 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ERN1O75460 977 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 C9P02748 559 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 CATP04040 527 aaKnown RBP12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ALDH3B2P48448 385 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 CYP4Z2PQ8N1L4 340 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 C11orf65Q8NCR3 313 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 ITPKCQ96DU7 683 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 SLC2A13Q96QE2 648 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 AASSQ9UDR5 926 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 MAP4K5Q9Y4K4 846 aa12.89□□□□□ -0.35
TRAPPC9-201ENST00000389328 TBL1XO60907 577 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 IGSF6O95976 241 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 GLUD1P00367 558 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 GABRB3P28472 473 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SERPINA4P29622 427 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PTGER3P43115 390 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 BLVRAP53004 296 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 MVKQ03426 396 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 DUSP4Q13115 394 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 NHSL2Q5HYW2 709 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PLEKHG7Q6ZR37 379 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ANKS3Q6ZW76 656 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 OR52B6Q8NGF0 335 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PTERQ96BW5 349 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SH3YL1Q96HL8 342 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 IL4I1Q96RQ9 567 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 NLNQ9BYT8 704 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 DERL2Q9GZP9 239 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 NMUR1Q9HB89 426 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 BCORQ6W2J9 1755 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 MAFKO60675 156 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PRKAR1AP10644 381 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PAICSP22234 425 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 EMX2Q04743 252 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 CACNG1Q06432 222 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PLD1Q13393 1074 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 LARP4Q71RC2 724 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 KRT74Q7RTS7 529 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SPNS2Q8IVW8 549 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 GALNT12Q8IXK2 581 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SPARTQ8N0X7 666 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 DTWD1Q8N5C7 304 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 TSPEARQ8WU66 669 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ACDQ96AP0 544 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 TMEM125Q96AQ2 219 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 MTERF1Q99551 399 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 SDR39U1Q9NRG7 319 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ANGPT4Q9Y264 503 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 ACOX3O15254 700 aa12.88□□□□□ -0.35
TRAPPC9-201ENST00000389328 PRSS56P0CW18 603 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms