RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 APOBEC3GQ9HC16 384 aaKnown RBP5.12□□□□□ -1.59
RNU6-40P-201ENST00000384254 TCF7L2Q9NQB0 619 aa5.12□□□□□ -1.59
RNU6-40P-201ENST00000384254 GKN1Q9NS71 199 aa5.12□□□□□ -1.59
RNU6-40P-201ENST00000384254 DDX43Q9NXZ2 648 aaKnown RBP5.12□□□□□ -1.59
RNU6-40P-201ENST00000384254 FEZF1A0PJY2 475 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 AP5Z1O43299 807 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 SMAD6O43541 496 aaKnown RBP5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 SIX3O95343 332 aaPredicted RBP5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 INHBAP08476 426 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 ACP2P11117 423 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 CYP11B2P19099 503 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 CD22P20273 847 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 CASTP20810 708 aaKnown RBP5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 FUT6P51993 359 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 PITX1P78337 314 aaPredicted RBP5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 MBTD1Q05BQ5 628 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 UGCGQ16739 394 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 LRRC73Q5JTD7 316 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 MPP7Q5T2T1 576 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 STXBP5Q5T5C0 1151 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 FAM91A1Q658Y4 838 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 LINGO4Q6UY18 593 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 DGLUCYQ7Z3D6 616 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 ARHGAP22Q7Z5H3 698 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 SLC9B2Q86UD5 537 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 EXOC3L1Q86VI1 746 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 CRYBG2Q8N1P7 616 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 ARHGAP24Q8N264 748 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 THOC1Q96FV9 657 aaKnown RBP5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 SGK494Q96LW2 274 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 INPP5KQ9BT40 448 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 UPF2Q9HAU5 1272 aaKnown RBP5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 KLHL1Q9NR64 748 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 SERINC1Q9NRX5 453 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 B3GAT1Q9P2W7 334 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 PCDHGB1Q9Y5G3 927 aa5.11□□□□□ -1.59
RNU6-40P-201ENST00000384254 TEX13DA0A0J9YY54 714 aaPredicted RBP5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 A0A1W2PS18 150 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 ENO4A6NNW6 628 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 INO80B-WBP1J3KQ70 363 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 GAPDHSO14556 408 aaPredicted RBP5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 LUC7L3O95232 432 aaKnown RBP5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 IGHV2-70P01814 119 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 PLA2G4BP0C869 781 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 VDRP11473 427 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 MPZP25189 248 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 PTPN3P26045 913 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 SOAT1P35610 550 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 HSD17B3P37058 310 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 CRKLP46109 303 aaKnown RBP5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 THBS3P49746 956 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 NAGLUP54802 743 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 POLR2LP62875 67 aaKnown RBP5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 RPL24P83731 157 aaKnown RBP5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 TUBB2AQ13885 445 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 C9orf57Q5W0N0 161 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 ZNF449Q6P9G9 518 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 C16orf82Q7Z2V1 217 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 NUP54Q7Z3B4 507 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 PHLDB2Q86SQ0 1253 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 TMPRSS11BQ86T26 416 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 C4orf19Q8IY42 314 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 TRIML1Q8N9V2 468 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 DHX58Q96C10 678 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 ZNF583Q96ND8 569 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 INTS14Q96SY0 518 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 TUBB2BQ9BVA1 445 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 C1QTNF4Q9BXJ3 329 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 VN1R1Q9GZP7 353 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 ERAP1Q9NZ08 941 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 PTTG2Q9NZH5 202 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 ARMCX3Q9UH62 379 aaPredicted RBP5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 SLC7A7Q9UM01 511 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 JRKLQ9Y4A0 524 aa5.1□□□□□ -1.59
RNU6-40P-201ENST00000384254 IGLV5-45A0A087WSX0 123 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 A0A1W2PPI3 338 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 PI4K2BG5E9Z4 385 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 H0YAE9 185 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 OVOL3O00110 214 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 PSMD14O00487 310 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 RNASEH1O60930 286 aaKnown RBP5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 BAG4O95429 457 aaKnown RBP5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 WDPCPO95876 746 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 CETPP11597 493 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 ADRA2CP18825 462 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 MNDAP41218 407 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 YWHAHQ04917 246 aaPredicted RBP5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 KEAP1Q14145 624 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 KIR2DS3Q14952 304 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 SYT14P1Q58G82 188 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 NHSL2Q5HYW2 709 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 NUDT13Q86X67 352 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 NUP93Q8N1F7 819 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 MR1Q95460 341 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 NSL1Q96IY1 281 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 MYADMQ96S97 322 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 GPATCH1Q9BRR8 931 aaKnown RBP5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 DNAI2Q9GZS0 605 aa5.09□□□□□ -1.59
RNU6-40P-201ENST00000384254 C2orf40Q9H1Z8 148 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms