RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 KIAA2013Q8IYS2 634 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 GLB1L3Q8NCI6 653 aaPredicted RBP21.07■□□□□ 0.96
TRIM54-202ENST00000380075 NANOGQ9H9S0 305 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 SPHK2Q9NRA0 654 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 RAD18Q9NS91 495 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 UBAP1Q9NZ09 502 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 GMPR2Q9P2T1 348 aaKnown RBP21.07■□□□□ 0.96
TRIM54-202ENST00000380075 B4GALT6Q9UBX8 382 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 EGFL7Q9UHF1 273 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 ZMYM5Q9UJ78 669 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 CDH7Q9ULB5 785 aa21.07■□□□□ 0.96
TRIM54-202ENST00000380075 NUAK1O60285 661 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 ULK1O75385 1050 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 TIPRLO75663 272 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 FAM58BPP0C7Q3 252 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 PSMC3P17980 439 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 FASP25445 335 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 AOAHP28039 575 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 B4GALNT1Q00973 533 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 CREB5Q02930 508 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 SP140Q13342 867 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 ARHGEF7Q14155 803 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 C6orf52Q5T4I8 152 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 INTS11Q5TA45 600 aaKnown RBP21.06■□□□□ 0.96
TRIM54-202ENST00000380075 LRRC70Q7Z2Q7 622 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 ST13P5Q8NFI4 369 aaPredicted RBP21.06■□□□□ 0.96
TRIM54-202ENST00000380075 OTUB2Q96DC9 234 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 CNBD2Q96M20 576 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 SLC12A9Q9BXP2 914 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 SLC32A1Q9H598 525 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 POLR3HQ9Y535 204 aaPredicted RBP21.06■□□□□ 0.96
TRIM54-202ENST00000380075 SLC16A5O15375 505 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 TCF3P15923 654 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 VARSP26640 1264 aaKnown RBP21.06■□□□□ 0.96
TRIM54-202ENST00000380075 CCR7P32248 378 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 RPIAP49247 311 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 DCDC1P59894 354 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 TXNL4AP83876 142 aaKnown RBP21.06■□□□□ 0.96
TRIM54-202ENST00000380075 RFTN2Q52LD8 501 aaPredicted RBP21.06■□□□□ 0.96
TRIM54-202ENST00000380075 RABL3Q5HYI8 236 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 PLEKHS1Q5SXH7 462 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 ZBTB49Q6ZSB9 765 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 KIAA0907Q7Z7F0 614 aaPredicted RBP21.06■□□□□ 0.96
TRIM54-202ENST00000380075 AMIGO2Q86SJ2 522 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 ADGRG5Q8IZF4 528 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 TRPV3Q8NET8 790 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 NAT14Q8WUY8 206 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 USP7Q93009 1102 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 EPB41L1Q9H4G0 881 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 ACTL8Q9H568 366 aa21.06■□□□□ 0.96
TRIM54-202ENST00000380075 SMIM31A0A1B0GVY4 71 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 KRT6AP02538 564 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 KRT6BP04259 564 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 PABPC4LP0CB38 370 aaKnown RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 SLC2A4P14672 509 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 TYRP14679 529 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 GNPDA1P46926 289 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 KRT6CP48668 564 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 HNMTP50135 292 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 Q6ZVU0 165 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 PAPD5Q8NDF8 572 aaKnown RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 OR2A12Q8NGT7 310 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 PARVBQ9HBI1 364 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 AGPAT4Q9NRZ5 378 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 GDE1Q9NZC3 331 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 NFKBIL1Q9UBC1 381 aaPredicted RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 KLQ9UEF7 1012 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 SLCO3A1Q9UIG8 710 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 PADI4Q9UM07 663 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 AURKCQ9UQB9 309 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 PABPN1LA6NDY0 278 aaKnown RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 C2CD4DB7Z1M9 353 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 CFAP99D6REC4 459 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 MANBAO00462 879 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 CLDN9O95484 217 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 LAMP2P13473 410 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 ATP1B2P14415 290 aaPredicted RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 VIPR1P32241 457 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 CASP2P42575 452 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 RPL38P63173 70 aaKnown RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 PWP1Q13610 501 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 NRF1Q16656 503 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 IMPG1Q17R60 797 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 GGTA1PQ4G0N0 100 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 CACHD1Q5VU97 1274 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 DLEU7Q6UYE1 221 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 NEK10Q6ZWH5 1172 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 ADIPOR2Q86V24 386 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 CHERPQ8IWX8 916 aaKnown RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 AADATQ8N5Z0 425 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 OR8J3Q8NGG0 315 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 HEPHQ9BQS7 1158 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 MRPS26Q9BYN8 205 aaKnown RBP21.05■□□□□ 0.96
TRIM54-202ENST00000380075 ARL15Q9NXU5 204 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 MARK1Q9P0L2 795 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 MAGEL2Q9UJ55 1249 aa21.05■□□□□ 0.96
TRIM54-202ENST00000380075 A0A0C4DFX4 3053 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 C7orf72A4D263 438 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 LOC730098B7Z3J9 87 aa21.04■□□□□ 0.96
TRIM54-202ENST00000380075 AP2A2O94973 939 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms