RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 MED16Q9Y2X0 877 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 PCDHB3Q9Y5E6 796 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 MYH15Q9Y2K3 1946 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 CNTNAP1P78357 1384 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 KCPQ6ZWJ8 1503 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 ARFGEF2Q9Y6D5 1785 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 LINC00587B1AMM8 73 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 AKAP8O43823 692 aaKnown RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 HBP1O60381 514 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 SNX4O95219 450 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 LYPLA2O95372 231 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 CNPP09543 421 aaKnown RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 RAB4AP20338 218 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 UBA1P22314 1058 aaKnown RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 MPSTP25325 297 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 NDST1P52848 882 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 FADDQ13158 208 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 DPYSL3Q14195 570 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 MOB2Q70IA6 237 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 TRPV1Q8NER1 839 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 RBCK1Q9BYM8 510 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 GSX2Q9BZM3 304 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 TGIF2Q9GZN2 237 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 SERHLQ9NQF3 203 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 VWA7Q9Y334 891 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 FMO3P31513 532 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 RPL22P35268 128 aaKnown RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 ALDH3A2P51648 485 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 ATP13A4Q4VNC1 1196 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 PITRM1Q5JRX3 1037 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 AURKBQ96GD4 344 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 EXOC2Q96KP1 924 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 SPNS1Q9H2V7 528 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 SPATA6Q9NWH7 488 aaPredicted RBP11.57□□□□□ -0.56
NPHP4-202ENST00000378161 ASB4Q9Y574 426 aa11.57□□□□□ -0.56
NPHP4-202ENST00000378161 TSTD3H0UI37 97 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ADH1CP00326 375 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 RLN2P04090 185 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 CD2P06729 351 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ITGB5P18084 799 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 KDELR1P24390 212 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ETV4P43268 484 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 TAS2R40P59535 323 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 C1DQ13901 141 aaKnown RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 RNF212Q495C1 297 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 PDZD9Q8IXQ8 264 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 CEP76Q8TAP6 659 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 PTP4A1Q93096 173 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 YIPF5Q969M3 257 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 TMEM176AQ96HP8 235 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 RBBP8Q99708 897 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 MED18Q9BUE0 208 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 NMRAL1Q9HBL8 299 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 NDRG3Q9UGV2 375 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 EEF2KO00418 725 aaKnown RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 GABARAPO95166 117 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 JUNDP17535 347 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 LCN1P31025 176 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 SIM2Q14190 667 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ANKRD22Q5VYY1 191 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ANKRD52Q8NB46 1076 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ST6GAL2Q96JF0 529 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 FOLH1BQ9HBA9 442 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 CHRAC1Q9NRG0 131 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 TAS2R3Q9NYW6 316 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 XPR1Q9UBH6 696 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 NAALAD2Q9Y3Q0 740 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 UBIAD1Q9Y5Z9 338 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 IGKV6D-41A0A0C4DH26 115 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 DLGAP1O14490 977 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 SLC2A2P11168 524 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 IVDP26440 423 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 MIPP30301 263 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 EPHX2P34913 555 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 MAP2K4P45985 399 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 FPGSQ05932 587 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 PTP4A2Q12974 167 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 FAM83EQ2M2I3 478 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 GFOD2Q3B7J2 385 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 EFCAB12Q6NXP0 572 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 CENPLQ8N0S6 344 aaPredicted RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 LRRC15Q8TF66 581 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 SEMA4DQ92854 862 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 MFSD14AQ96MC6 490 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 SLC39A10Q9ULF5 831 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 RUVBL1Q9Y265 456 aaKnown RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 hCG_1818297A0A087WSY0 165 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 CALCAP01258 141 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 RD3LP0DJH9 198 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 MAP2K6P52564 334 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 RPP30P78346 268 aaKnown RBP11.56□□□□□ -0.56
NPHP4-202ENST00000378161 GPR19Q15760 415 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 CYP27C1Q4G0S4 372 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 DDI2Q5TDH0 399 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 EPGNQ6UW88 154 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ZNF605Q86T29 641 aa11.56□□□□□ -0.56
NPHP4-202ENST00000378161 ADGRG3Q86Y34 549 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms