RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 NODALQ96S42 347 aa17.47■□□□□ 0.39
CNTNAP3-204ENST00000377656 RIOK2Q9BVS4 552 aaKnown RBP17.47■□□□□ 0.39
CNTNAP3-204ENST00000377656 FAM159BA6NKW6 160 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 HAS3O00219 553 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 PSIP1O75475 530 aaKnown RBP17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 PRPS1L1P21108 318 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 INCA1Q0VD86 236 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 IFNLR1Q8IU57 520 aaPredicted RBP17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 ZNF433Q8N7K0 673 aaPredicted RBP17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 GTPBP3Q969Y2 492 aaKnown RBP17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 KCPQ6ZWJ8 1503 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 SLC25A11Q02978 314 aaKnown RBP17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 KCNJ11Q14654 390 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 SLC9B1Q4ZJI4 515 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 OSTM1Q86WC4 334 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 COX18Q8N8Q8 333 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 ZSCAN5AQ9BUG6 496 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 LRRC3Q9BY71 257 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 SLC30A4O14863 429 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 NFKB2Q00653 900 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 OGDHQ02218 1023 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 SLC13A2Q13183 592 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 KLHL24Q6TFL4 600 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 ATG14Q6ZNE5 492 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 SIX5Q8N196 739 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 TRPV3Q8NET8 790 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 TTLQ8NG68 377 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 PIWIL1Q96J94 861 aaKnown RBP17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 TRNT1Q96Q11 434 aaKnown RBP17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 USP29Q9HBJ7 922 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 ZNF222Q9UK12 451 aa17.46■□□□□ 0.39
CNTNAP3-204ENST00000377656 FANCGO15287 622 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 HMGB3O15347 200 aaKnown RBP17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 RAP2AP10114 183 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 ACP5P13686 325 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 GJA1P17302 382 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 ARFIP1P53367 373 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 PLET1Q6UQ28 207 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 SIAH1Q8IUQ4 282 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 MCEMP1Q8IX19 187 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 NRSN1Q8IZ57 195 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 CAPSLQ8WWF8 208 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 TAPBPLQ9BX59 468 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 ING4Q9UNL4 249 aa17.46■□□□□ 0.38
CNTNAP3-204ENST00000377656 A0A1W2PRB8 838 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 A8MT66 165 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ARHGEF33A8MVX0 844 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 CXorf49A8MYA2 514 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 UBXN7O94888 489 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 GADD45GO95257 159 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 FAUP35544 74 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 PAFAH1B3Q15102 231 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 LIN52Q52LA3 116 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ZNF311Q5JNZ3 666 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 TMEM198Q66K66 360 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 SLC9A4Q6AI14 798 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 MBOAT1Q6ZNC8 495 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 TMEM209Q96SK2 561 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ZCCHC3Q9NUD5 404 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 VPS29Q9UBQ0 182 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 IL36AQ9UHA7 158 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ANKRD66B4E2M5 251 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ECI2O75521 394 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 LDOC1O95751 146 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 POU2F1P14859 743 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 MYBPC3Q14896 1274 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 CHRNA6Q15825 494 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 NAPRTQ6XQN6 538 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 MMAAQ8IVH4 418 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 PLEKHO2Q8TD55 490 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 C10orf82Q8WW14 230 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 NPY6RQ99463 290 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 SMOQ99835 787 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 C11orf49Q9H6J7 331 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 CARS2Q9HA77 564 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 DNAAF2Q9NVR5 837 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 CDH7Q9ULB5 785 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 TTC24A2A3L6 582 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 PITPNM1O00562 1244 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 CBFA2T3O75081 653 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ATP6V1C2Q8NEY4 427 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 IPCEF1Q8WWN9 437 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 GPATCH1Q9BRR8 931 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 COPS7AQ9UBW8 275 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 PRORSD1PA6NEY8 169 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 TRMUO75648 421 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 AP2A2O94973 939 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 HMGCS1Q01581 520 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 LRRC32Q14392 662 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 TNFAIP8L2Q6P589 184 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 ZC3HC1Q86WB0 502 aaKnown RBP17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 NUDT13Q86X67 352 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 GPER1Q99527 375 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 PDE10AQ9Y233 779 aa17.45■□□□□ 0.38
CNTNAP3-204ENST00000377656 DHFRP00374 187 aa17.44■□□□□ 0.38
CNTNAP3-204ENST00000377656 DDX6P26196 483 aaKnown RBP eCLIP17.44■□□□□ 0.38
CNTNAP3-204ENST00000377656 S100GP29377 79 aa17.44■□□□□ 0.38
CNTNAP3-204ENST00000377656 KHKP50053 298 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms