RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SOBPA7XYQ1 873 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 KPNA5O15131 536 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 CKMT2P17540 419 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 GGT5P36269 586 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 PLIN5Q00G26 463 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 GBX1Q14549 363 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 POM121L1PQ3SYA9 428 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 LIN52Q52LA3 116 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 TTC23LQ6PF05 361 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 DLEU7Q6UYE1 221 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 LRRC70Q7Z2Q7 622 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 KIAA0907Q7Z7F0 614 aaPredicted RBP19.76■□□□□ 0.75
VSX1-202ENST00000376709 HOMEZQ8IX15 550 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 ADGRG5Q8IZF4 528 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 LIX1Q8N485 282 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 ELMO1Q92556 727 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 USP7Q93009 1102 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 SLC29A1Q99808 456 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 MTG2Q9H4K7 406 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 TRANK1O15050 2925 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 GRXCR1A8MXD5 290 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 C5orf67F2Z3F1 127 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 SLC9A3R1O14745 358 aaPredicted RBP19.76■□□□□ 0.75
VSX1-202ENST00000376709 HNRNPA1P09651 372 aaKnown RBP eCLIP19.76■□□□□ 0.75
VSX1-202ENST00000376709 MPC1LP0DKB6 136 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 PSMC3P17980 439 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 CYP2A7P20853 494 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 FASP25445 335 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 HNMTP50135 292 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 DCDC1P59894 354 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 SP140Q13342 867 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 SLC13A3Q8WWT9 602 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 CGREF1Q99674 301 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 OSBPL11Q9BXB4 747 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 DPY30Q9C005 99 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 AGPAT4Q9NRZ5 378 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 FAM8A1Q9UBU6 413 aa19.76■□□□□ 0.75
VSX1-202ENST00000376709 FAM149AA5PLN7 773 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 KCNH1O95259 989 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 TNFAIP8O95379 198 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 CTSLP07711 333 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 FAM58BPP0C7Q3 252 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 SMIM18P0DKX4 95 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 EPORP19235 508 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 HTR1EP28566 365 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 MTPNP58546 118 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 PRKCQQ04759 706 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 PWP1Q13610 501 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 FAM174BQ3ZCQ3 159 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 RALGPS2Q86X27 583 aaPredicted RBP19.75■□□□□ 0.75
VSX1-202ENST00000376709 BEND7Q8N7W2 519 aaPredicted RBP19.75■□□□□ 0.75
VSX1-202ENST00000376709 PYCR2Q96C36 320 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 RIOK2Q9BVS4 552 aaKnown RBP19.75■□□□□ 0.75
VSX1-202ENST00000376709 C1orf109Q9NX04 203 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 USP22Q9UPT9 525 aa19.75■□□□□ 0.75
VSX1-202ENST00000376709 PLXNA2O75051 1894 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 SAC3D1A6NKF1 404 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 OR2AG2A6NM03 316 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 TIMP2P16035 220 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 PTCHD3Q3KNS1 767 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 PLA2G4EQ3MJ16 856 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 FAM109BQ6ICB4 259 aaPredicted RBP19.74■□□□□ 0.75
VSX1-202ENST00000376709 ZNF366Q8N895 744 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 MCOLN3Q8TDD5 553 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 SELENOMQ8WWX9 145 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 ZNF707Q96C28 371 aaPredicted RBP19.74■□□□□ 0.75
VSX1-202ENST00000376709 P2RY13Q9BPV8 354 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 ZSCAN5AQ9BUG6 496 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 ELOVL6Q9H5J4 265 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 C5orf42Q9H799 3197 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 KANSL1LA0AUZ9 987 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 PGM3O95394 542 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 PDYNP01213 254 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 FTH1P02794 183 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 DGKGP49619 791 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 DHCR24Q15392 516 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 MAPKAPK3Q16644 382 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 ZXDCQ2QGD7 858 aaPredicted RBP19.74■□□□□ 0.75
VSX1-202ENST00000376709 ZNF284Q2VY69 593 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 ZNF805Q5CZA5 627 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 PROSER1Q86XN7 944 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 TRAM1L1Q8N609 369 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 GLB1L3Q8NCI6 653 aaPredicted RBP19.74■□□□□ 0.75
VSX1-202ENST00000376709 TRPV3Q8NET8 790 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 ASZ1Q8WWH4 475 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 ACPTQ9BZG2 426 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 RAD18Q9NS91 495 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 SNX6Q9UNH7 406 aa19.74■□□□□ 0.75
VSX1-202ENST00000376709 MRPS23Q9Y3D9 190 aaKnown RBP19.74■□□□□ 0.75
VSX1-202ENST00000376709 TCRBV5S2A0A599 114 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 GFYI3L273 518 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 SOCS2O14508 198 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 ZNF197O14709 1029 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 SLC16A5O15375 505 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 FCGR1AP12314 374 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 MYBPC1Q00872 1141 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 KIAA0040Q15053 153 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 HENMT1Q5T8I9 393 aaKnown RBP19.73■□□□□ 0.75
VSX1-202ENST00000376709 PPP4R4Q6NUP7 873 aa19.73■□□□□ 0.75
VSX1-202ENST00000376709 IYDQ6PHW0 289 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms