RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 MS4A13Q5J8X5 152 aa16.18■□□□□ 0.18
TRIM39-201ENST00000376656 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRIM39-201ENST00000376656 SHQ1Q6PI26 577 aaKnown RBP16.18■□□□□ 0.18
TRIM39-201ENST00000376656 VASH1Q7L8A9 365 aaPredicted RBP16.18■□□□□ 0.18
TRIM39-201ENST00000376656 OR52E4Q8NGH9 312 aa16.18■□□□□ 0.18
TRIM39-201ENST00000376656 C1orf74Q96LT6 269 aa16.18■□□□□ 0.18
TRIM39-201ENST00000376656 ZBTB18Q99592 522 aa16.18■□□□□ 0.18
TRIM39-201ENST00000376656 ACBD6Q9BR61 282 aa16.18■□□□□ 0.18
TRIM39-201ENST00000376656 POLR1EQ9GZS1 481 aaKnown RBP16.18■□□□□ 0.18
TRIM39-201ENST00000376656 NEK6Q9HC98 313 aa16.18■□□□□ 0.18
TRIM39-201ENST00000376656 TRMT6Q9UJA5 497 aaKnown RBP16.18■□□□□ 0.18
TRIM39-201ENST00000376656 FNDC3AQ9Y2H6 1198 aaKnown RBP16.18■□□□□ 0.18
TRIM39-201ENST00000376656 AGAP5A6NIR3 686 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 METTL15A6NJ78 407 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 KRT20P35900 424 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CLK1P49759 484 aaKnown RBP16.17■□□□□ 0.18
TRIM39-201ENST00000376656 DMPKQ09013 629 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 FADDQ13158 208 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ZDHHC21Q8IVQ6 265 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 PIANPQ8IYJ0 282 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 KIAA1958Q8N8K9 716 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 PYURFQ96I23 114 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 PKMYT1Q99640 499 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ZFP14Q9HCL3 533 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 NLE1Q9NVX2 485 aaPredicted RBP16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ABCG2Q9UNQ0 655 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CAB39Q9Y376 341 aaPredicted RBP16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ACTL7AQ9Y615 435 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ILVBLA1L0T0 632 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 VPS26AO75436 327 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 LIPAP38571 399 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 NEK2P51955 445 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ZNF140P52738 457 aaPredicted RBP16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CXCR4P61073 352 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 COPZ1P61923 177 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 TRAF3Q13114 568 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 PSAPL1Q6NUJ1 521 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 AHSA2Q719I0 299 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CD200R1Q8TD46 325 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ATL1Q8WXF7 558 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CCL27Q9Y4X3 112 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 ANKRD34BA5PLL1 514 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CLDN24A6NM45 220 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 TNFRSF10BO14763 440 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 PGLSO95336 258 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 PGRP06401 933 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 IL2P60568 153 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 KEAP1Q14145 624 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 MAD2L1BPQ15013 274 aaPredicted RBP16.17■□□□□ 0.18
TRIM39-201ENST00000376656 PLEKHG6Q3KR16 790 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CTSL3PQ5NE16 218 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 CLHC1Q8NHS4 586 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 SERPINB11Q96P15 392 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 MMP27Q9H306 513 aa16.17■□□□□ 0.18
TRIM39-201ENST00000376656 MOV10Q9HCE1 1003 aaKnown RBP16.17■□□□□ 0.18
TRIM39-201ENST00000376656 AGO1Q9UL18 857 aaKnown RBP16.17■□□□□ 0.18
TRIM39-201ENST00000376656 MYO1GB0I1T2 1018 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 RAD51BO15315 384 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 DIRAS1O95057 198 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 MYCLP1P12525 358 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 PKMP14618 531 aaKnown RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 CRYBB1P53674 252 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 HMGCS1Q01581 520 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 MVKQ03426 396 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 PRSS36Q5K4E3 855 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 SPATC1Q76KD6 591 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 PROX1Q92786 737 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 ZBED2Q9BTP6 218 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 DPY30Q9C005 99 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 IQCF5A8MTL0 148 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 FFAR3O14843 346 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 GPR42O15529 346 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 F2P00734 622 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 DBTP11182 482 aaKnown RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 ODC1P11926 461 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 PBX3P40426 434 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 IL10RBQ08334 325 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 AFTPHQ6ULP2 937 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 GALNT13Q8IUC8 556 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 CCDC71Q8IV32 467 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 SYTL1Q8IYJ3 562 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 LIX1Q8N485 282 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 TTC29Q8NA56 475 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 FAM120BQ96EK7 910 aaKnown RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 FARSBQ9NSD9 589 aaKnown RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 C1orf109Q9NX04 203 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 KCNH4Q9UQ05 1017 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 UGT2A1Q9Y4X1 527 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 TAF4O00268 1085 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 S100BP04271 92 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 GTF2H2Q13888 395 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 ZNF235Q14590 738 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 CLPPQ16740 277 aaPredicted RBP16.16■□□□□ 0.18
TRIM39-201ENST00000376656 UPP1Q16831 310 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 SDHAF4Q5VUM1 108 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 RAP1GAP2Q684P5 730 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 KDM4DQ6B0I6 523 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 GTF2H2CQ6P1K8 395 aa16.16■□□□□ 0.18
TRIM39-201ENST00000376656 SLC39A13Q96H72 371 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms