RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ACY1Q03154 408 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 CALCOCO2Q13137 446 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 INSCQ1MX18 579 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 BBS9Q3SYG4 887 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 KHDC1Q4VXA5 237 aaKnown RBP11.85□□□□□ -0.51
LSM2-208ENST00000375661 ZNF648Q5T619 568 aaPredicted RBP11.85□□□□□ -0.51
LSM2-208ENST00000375661 ARMC3Q5W041 872 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 HIST2H2BCQ6DN03 193 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 SNX20Q7Z614 316 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 ADGRG6Q86SQ4 1221 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 KMT5CQ86Y97 462 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 FBXO25Q8TCJ0 367 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 GLYATL1Q969I3 302 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 HDAC10Q969S8 669 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 ELMO2Q96JJ3 720 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 EBNA1BP2Q99848 306 aaKnown RBP11.85□□□□□ -0.51
LSM2-208ENST00000375661 TRIM55Q9BYV6 548 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 SLC29A3Q9BZD2 475 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 OR2AG1Q9H205 316 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 FAM96AQ9H5X1 160 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 ASB8Q9H765 288 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 ARFGAP3Q9NP61 516 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 ACSS2Q9NR19 701 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 ZNF451Q9Y4E5 1061 aa11.85□□□□□ -0.51
LSM2-208ENST00000375661 UTP20O75691 2785 aaKnown RBP11.85□□□□□ -0.51
LSM2-208ENST00000375661 TRBV5-4A0A0C4DH59 114 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 ZCWPW2A0A1B0GU75 182 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 PDZK1P1A8MUH7 402 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 E7ESA3 106 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 KCNJ13O60928 360 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 SEMA7AO75326 666 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 MTX2O75431 263 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 DNAJB5O75953 348 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 GOT2P00505 430 aaKnown RBP11.84□□□□□ -0.51
LSM2-208ENST00000375661 VCLP18206 1134 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 IDSP22304 550 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 ARNTP27540 789 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 FOXN2P32314 431 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 ARL4CP56559 192 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 TUBB3Q13509 450 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 ITGA9Q13797 1035 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 HIF1AQ16665 826 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 ANKRD20A4Q4UJ75 823 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 DNAJC21Q5F1R6 531 aaKnown RBP11.84□□□□□ -0.51
LSM2-208ENST00000375661 GPRC6AQ5T6X5 926 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 CASC4Q6P4E1 433 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 KLHL35Q6PF15 583 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 PIANPQ8IYJ0 282 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 PDIK1LQ8N165 341 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 SIDT2Q8NBJ9 832 aaKnown RBP11.84□□□□□ -0.51
LSM2-208ENST00000375661 RSC1A1Q92681 617 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 SLC41A2Q96JW4 573 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 PLAC1Q9HBJ0 212 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 ZDHHC18Q9NUE0 388 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 SMOXQ9NWM0 555 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 SLC23A2Q9UGH3 650 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 TEX264Q9Y6I9 313 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 UNC79Q9P2D8 2635 aa11.84□□□□□ -0.51
LSM2-208ENST00000375661 MYO9AB2RTY4 2548 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 KIF1CO43896 1103 aaKnown RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 DPM1O60762 260 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 CEACAM4O75871 244 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 TIAF1O95411 115 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 RHOXF2BP0C7M4 288 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 BRAFP15056 766 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ITGALP20701 1170 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ECHS1P30084 290 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ELK3P41970 407 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ARCN1P48444 511 aaKnown RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 CAV1Q03135 178 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 CACNG1Q06432 222 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 PDIA2Q13087 525 aaKnown RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 GPR18Q14330 331 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 SEMA3AQ14563 771 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 FASTKD3Q14CZ7 662 aaKnown RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 INPP5JQ15735 1006 aaPredicted RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 GPR33Q49SQ1 333 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 NADK2Q4G0N4 442 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ZRANB3Q5FWF4 1079 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 HP1BP3Q5SSJ5 553 aaPredicted RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 KIAA0930Q6ICG6 404 aaPredicted RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 PWWP2BQ6NUJ5 590 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 IRGCQ6NXR0 463 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 CRTC3Q6UUV7 619 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 FAM92BQ6ZTR7 304 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 NXPE1Q8N323 547 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 DDHD1Q8NEL9 900 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 OR6P1Q8NGX9 317 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 OR4L1Q8NH43 312 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 OR8K5Q8NH50 307 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ZNF669Q96BR6 464 aaPredicted RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 CXorf40BQ96DE9 158 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ZNF514Q96K75 400 aaPredicted RBP11.83□□□□□ -0.52
LSM2-208ENST00000375661 CD180Q99467 661 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 RHOXF2Q9BQY4 288 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 ING2Q9H160 280 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 FAM114A2Q9NRY5 505 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 SAMD15Q9P1V8 674 aa11.83□□□□□ -0.52
LSM2-208ENST00000375661 CRLS1Q9UJA2 301 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms