RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 KCNE1P15382 129 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 C21orf33P30042 268 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-204ENST00000375608 PSMD8P48556 350 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 BOP1Q14137 746 aaKnown RBP13.48□□□□□ -0.25
MCF2L-204ENST00000375608 MSANTD2Q6P1R3 559 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 CYP4Z1Q86W10 505 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 ZFAND4Q86XD8 727 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 Q96MT0 163 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 DPH2Q9BQC3 489 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-204ENST00000375608 RMND5AQ9H871 391 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 NEK6Q9HC98 313 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 ERVK13-1Q9NX77 482 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 LCHNA4D1U4 455 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 SNAI1O95863 264 aaPredicted RBP13.48□□□□□ -0.25
MCF2L-204ENST00000375608 ITGB1P05556 798 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 RHOQP17081 205 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 GP2P55259 537 aaKnown RBP13.48□□□□□ -0.25
MCF2L-204ENST00000375608 TAF10Q12962 218 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 OXA1LQ15070 435 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF404Q494X3 552 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF605Q86T29 641 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 DCP2Q8IU60 420 aaKnown RBP13.48□□□□□ -0.25
MCF2L-204ENST00000375608 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 IL37Q9NZH6 218 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 PCTPQ9UKL6 214 aa13.48□□□□□ -0.25
MCF2L-204ENST00000375608 SMIM35A0A1B0GVV1 85 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 SLC25A14O95258 325 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 RHOCP08134 193 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 EPB42P16452 691 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ITPKAP23677 461 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 DNAJB1P25685 340 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 SOX6P35712 828 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ALDH7A1P49419 539 aaKnown RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 RUNX1T1Q06455 604 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 GALNT1Q10472 559 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 TIGD6Q17RP2 521 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF648Q5T619 568 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 DESI1Q6ICB0 168 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 Q6ZSR9 355 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 GOLGA7Q7Z5G4 137 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 FAM83FQ8NEG4 500 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 NLGN2Q8NFZ4 835 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 MROQ9BYG7 248 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 GPN2Q9H9Y4 310 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF556Q9HAH1 456 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 POLR3BQ9NW08 1133 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 TMEM161AQ9NX61 479 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 INTS6Q9UL03 887 aaKnown RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 EFCAB10A6NFE3 127 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 KRT6AP02538 564 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 KRT6BP04259 564 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 HIST1H2AGP0C0S8 130 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 GGT1P19440 569 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 HIST1H2ADP20671 130 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 KRT6CP48668 564 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 TTPAP49638 278 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 KCNQ1P51787 676 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 SYT12Q8IV01 421 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 HIST1H2AHQ96KK5 128 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF583Q96ND8 569 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 HIST1H2AJQ99878 128 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 H2AFJQ9BTM1 129 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ATG10Q9H0Y0 220 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 CARS2Q9HA77 564 aaKnown RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 C1orf109Q9NX04 203 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 DNMT3AQ9Y6K1 912 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 UGT2B11O75310 529 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 EPHA2P29317 976 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 PPP3CCP48454 512 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 CRYBB1P53674 252 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZXDBP98169 803 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF177Q13360 481 aaPredicted RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 NKG7Q16617 165 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZFP69Q49AA0 526 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 CTXN3Q4LDR2 81 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 MS4A13Q5J8X5 152 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 TMEM179BQ7Z7N9 219 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 GPR156Q8NFN8 814 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 BARD1Q99728 777 aaKnown RBP13.47□□□□□ -0.25
MCF2L-204ENST00000375608 OSBPL10Q9BXB5 764 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 SMOC2Q9H3U7 446 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 RNF167Q9H6Y7 350 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 ZNF221Q9UK13 617 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 DNAH12Q6ZR08 3092 aa13.47□□□□□ -0.25
MCF2L-204ENST00000375608 A0A0G2JLL6 359 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-204ENST00000375608 LOC730098B7Z3J9 87 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 CCRL2O00421 344 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 FFAR2O15552 330 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 RFPL2O75678 378 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 GRSF1Q12849 480 aaKnown RBP eCLIP13.46□□□□□ -0.253e-6■■□□□ 12.8
MCF2L-204ENST00000375608 PRRT2Q7Z6L0 340 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-204ENST00000375608 FAM217AQ8IXS0 508 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 SVOPLQ8N434 492 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.25
MCF2L-204ENST00000375608 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.25
MCF2L-204ENST00000375608 ABCB9Q9NP78 766 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms