RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ITGB6P18564 788 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 RPS9P46781 194 aaKnown RBP11.97□□□□□ -0.49
UBR4-203ENST00000375225 EPHA5P54756 1037 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 ARHGEF7Q14155 803 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 ABRAXAS2Q15018 415 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 CDKN3Q16667 212 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 SLC36A3Q495N2 470 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 GGTA1PQ4G0N0 100 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 PLEKHS1Q5SXH7 462 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 C22orf39Q6P5X5 142 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 SLC2A7Q6PXP3 512 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 MSANTD1Q6ZTZ1 278 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 NEK10Q6ZWH5 1172 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 GPR141Q7Z602 305 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 KIAA2013Q8IYS2 634 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 ADAMTS19Q8TE59 1207 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 CYGBQ8WWM9 190 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 BIRC7Q96CA5 298 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 TIFAQ96CG3 184 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 NMD3Q96D46 503 aaKnown RBP11.97□□□□□ -0.49
UBR4-203ENST00000375225 MPP4Q96JB8 637 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 VPS50Q96JG6 964 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 TEX37Q96LM6 180 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 GORASP2Q9H8Y8 452 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 ACTR8Q9H981 624 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 CERS4Q9HA82 394 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 DUS2Q9NX74 493 aaKnown RBP11.97□□□□□ -0.49
UBR4-203ENST00000375225 RSL24D1Q9UHA3 163 aaKnown RBP11.97□□□□□ -0.49
UBR4-203ENST00000375225 OAZ3Q9UMX2 235 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 MAPRE3Q9UPY8 281 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 HS3ST2Q9Y278 367 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 SCN8AQ9UQD0 1980 aa11.97□□□□□ -0.49
UBR4-203ENST00000375225 K7ERQ8 282 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 ZNF701M0R085 212 aaPredicted RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 MANBAO00462 879 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 TAPBPO15533 448 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 TPST1O60507 370 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 NOL3O60936 208 aaKnown RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 SEC22BO75396 215 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 ERN1O75460 977 aaKnown RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 RFPL2O75678 378 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 RSL1D1O76021 490 aaKnown RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 AP2A2O94973 939 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 RHOP08100 348 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 GGT1P19440 569 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 IL12AP29459 219 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 GGT5P36269 586 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 ALDH3B2P48448 385 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 RPIAP49247 311 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 HTR6P50406 440 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 HNRNPFP52597 415 aaKnown RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 AP1S2P56377 157 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 KCNC3Q14003 757 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 CARD16Q5EG05 197 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 ATG9BQ674R7 924 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 DLEU7Q6UYE1 221 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 PATL1Q86TB9 770 aaKnown RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 RBM23Q86U06 439 aaKnown RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 PLPP6Q8IY26 295 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 ZNF786Q8N393 782 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 TMEM132CQ8N3T6 1108 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 SVOPLQ8N434 492 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 OR2T12Q8NG77 320 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 OR6K2Q8NGY2 324 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 STARD8Q92502 1023 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 USP7Q93009 1102 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 EID2BQ96D98 161 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 ECHDC3Q96DC8 303 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 HIC2Q96JB3 615 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 RNF145Q96MT1 663 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 CDCA3Q99618 268 aaPredicted RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 CHID1Q9BWS9 393 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 BOCQ9BWV1 1114 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 PARVBQ9HBI1 364 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 INTS7Q9NVH2 962 aaKnown RBP11.96□□□□□ -0.49
UBR4-203ENST00000375225 ARL15Q9NXU5 204 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 FADS3Q9Y5Q0 445 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 HCFC2Q9Y5Z7 792 aa11.96□□□□□ -0.49
UBR4-203ENST00000375225 SERTM1A2A2V5 107 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 ZNF197O14709 1029 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 PER2O15055 1255 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 VILLO15195 856 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 SMAD6O43541 496 aaKnown RBP11.96□□□□□ -0.5
UBR4-203ENST00000375225 FTH1P02794 183 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 MTHFD1P11586 935 aaKnown RBP11.96□□□□□ -0.5
UBR4-203ENST00000375225 SRCP12931 536 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 NNMTP40261 264 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 CDK9P50750 372 aaKnown RBP11.96□□□□□ -0.5
UBR4-203ENST00000375225 CYP4F3Q08477 520 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 MYBPC3Q14896 1274 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 BRAT1Q6PJG6 821 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 CRTC1Q6UUV9 634 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 UBE2R2Q712K3 238 aaPredicted RBP11.96□□□□□ -0.5
UBR4-203ENST00000375225 LPCAT2Q7L5N7 544 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 ERI1Q8IV48 349 aaKnown RBP11.96□□□□□ -0.5
UBR4-203ENST00000375225 BBS7Q8IWZ6 715 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 LIX1Q8N485 282 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 METTL25Q8N6Q8 603 aa11.96□□□□□ -0.5
UBR4-203ENST00000375225 TTC16Q8NEE8 873 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms