RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 ATL1Q8WXF7 558 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 CNDP1Q96KN2 507 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 INSM2Q96T92 566 aaPredicted RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 EGFL8Q99944 293 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 EPN3Q9H201 632 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 TRIT1Q9H3H1 467 aaKnown RBP16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 MVB12BQ9H7P6 319 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 PRDM8Q9NQV8 689 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 DNAJC28Q9NX36 388 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 PCTPQ9UKL6 214 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 PSMD13Q9UNM6 376 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 ASF1AQ9Y294 204 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 HEBP2Q9Y5Z4 205 aa16.77■□□□□ 0.28
HLA-DMA-201ENST00000374843 PDZK1P1A8MUH7 402 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SCAMP1O15126 338 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SIX3O95343 332 aaPredicted RBP16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 GUCA1CO95843 209 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 MTHFD1P11586 935 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 F3P13726 295 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 RPL10P27635 214 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 EEF1DP29692 281 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 HALP42357 657 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SLC1A6P48664 564 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 CSNK1EP49674 416 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 AGTR2P50052 363 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 CLCA4Q14CN2 919 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 RPE65Q16518 533 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 CCSMST1Q4G0I0 132 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SLC30A9Q6PML9 568 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 LRRC70Q7Z2Q7 622 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 RABEPKQ7Z6M1 372 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SYT12Q8IV01 421 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 LRRC34Q8IZ02 419 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SDR16C5Q8N3Y7 309 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 OR5AR1Q8NGP9 310 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 OR9A1PQ8NGU1 263 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 RAD51AP1Q96B01 352 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 C12orf66Q96MD2 445 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SORT1Q99523 831 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 PKP4Q99569 1192 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SLCO1B3Q9NPD5 702 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 WWOXQ9NZC7 414 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 SPATA7Q9P0W8 599 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 TAAR2Q9P1P5 351 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 STOX2Q9P2F5 926 aaPredicted RBP16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 ASB1Q9Y576 335 aa16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 ZFC3H1O60293 1989 aaKnown RBP16.76■□□□□ 0.27
HLA-DMA-201ENST00000374843 TP53BP1Q12888 1972 aaPredicted RBP16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 A0A1B0GVT2 93 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 E2F3O00716 465 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 ITM2AO43736 263 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 EML2O95834 649 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 CELA2BP08218 269 aaPredicted RBP16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 VIMP08670 466 aaKnown RBP16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 DRD4P21917 467 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 IMPA1P29218 277 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 SEC24CP53992 1094 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 HNRNPKP61978 463 aaKnown RBP eCLIP16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 BNC1Q01954 994 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 ARHGAP19Q14CB8 494 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 ZXDCQ2QGD7 858 aaPredicted RBP16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 ZNF542PQ5EBM4 170 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 CFAP157Q5JU67 520 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 ANKS6Q68DC2 871 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 DUS1LQ6P1R4 473 aaKnown RBP16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 ATG14Q6ZNE5 492 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 LSMEM2Q8N112 164 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 CCNYL1Q8N7R7 359 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 MENTQ9BUN1 341 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 CD244Q9BZW8 370 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 C20orf27Q9GZN8 174 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 TMEM74BQ9NUR3 256 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 FGFR1OP2Q9NVK5 253 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 SCHIP1Q9P0W5 487 aaPredicted RBP16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 SPASTQ9UBP0 616 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 SPAG17Q6Q759 2223 aa16.75■□□□□ 0.27
HLA-DMA-201ENST00000374843 KRT87PA6NCN2 255 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 LRRC14BA6NHZ5 514 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 LYPLA1O75608 230 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 SLC16A8O95907 504 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 CTSEP14091 401 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 SLC2A4P14672 509 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 NDUFS1P28331 727 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 HSD17B2P37059 387 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 RXRGP48443 463 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 PIK3CGP48736 1102 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 LCP2Q13094 533 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 SIM2Q14190 667 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 ELOCQ15369 112 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 KIF19Q2TAC6 998 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 C18orf21Q32NC0 220 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 PRRT3Q5FWE3 981 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 ARL13AQ5H913 290 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 FAM47EQ6ZV65 393 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 ZNF548Q8NEK5 533 aaPredicted RBP16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 OR56A3Q8NH54 315 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 PITPNM3Q9BZ71 974 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 NSRP1Q9H0G5 558 aaKnown RBP16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 KIR3DX1Q9H7L2 352 aa16.74■□□□□ 0.27
HLA-DMA-201ENST00000374843 CAAP1Q9H8G2 361 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms