RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 ZNF540Q8NDQ6 660 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 GIPC2Q8TF65 315 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 ZNF382Q96SR6 550 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 IPPKQ9H8X2 491 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 MARCH7Q9H992 704 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 ABCG2Q9UNQ0 655 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 PKP3Q9Y446 797 aa13.32□□□□□ -0.28
PRKN-205ENST00000366897 MOXD2PA6NHM9 499 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 TTC34A8MYJ7 566 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 CREG1O75629 220 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 CD40LGP29965 261 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 PCYT1AP49585 367 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 GBX1Q14549 363 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 HIST2H2ACQ16777 129 aaPredicted RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 SOWAHCQ53LP3 525 aaPredicted RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 DYNC2LI1Q8TCX1 351 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 TADA1Q96BN2 335 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 SLC39A13Q96H72 371 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKN-205ENST00000366897 TLR6Q9Y2C9 796 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 ATP11BQ9Y2G3 1177 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 CAB39Q9Y376 341 aaPredicted RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 NDST3O95803 873 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 CYP11A1P05108 521 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 SPNP16150 400 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 GTF2E2P29084 291 aaKnown RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 FOXD4Q12950 439 aaPredicted RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 KIAA0040Q15053 153 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 SUSD1Q6UWL2 747 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 AHSA2Q719I0 299 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 EFL1Q7Z2Z2 1120 aaKnown RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 ADHFE1Q8IWW8 467 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 OR5K1Q8NHB7 308 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 OR52E6Q96RD3 313 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 ZNF300Q96RE9 604 aaPredicted RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 INPP5KQ9BT40 448 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 GORASP2Q9H8Y8 452 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 ZBTB20Q9HC78 741 aaPredicted RBP13.31□□□□□ -0.28
PRKN-205ENST00000366897 FLRT1Q9NZU1 646 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 PLXNB2O15031 1838 aa13.31□□□□□ -0.28
PRKN-205ENST00000366897 SLC12A8A0AV02 714 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 WASH4PA8MWX3 477 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 AGRPO00253 132 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 ARNTLO00327 626 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 MGEA5O60502 916 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 DLGAP3O95886 979 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 PGRP06401 933 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 PBX3P40426 434 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 CLK3P49761 638 aaKnown RBP13.3□□□□□ -0.28
PRKN-205ENST00000366897 ARPP19P56211 112 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 PHC1P78364 1004 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 GTF2H2Q13888 395 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 CCL14Q16627 93 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 GTF2H2CQ6P1K8 395 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 Q6ZPB1 254 aaPredicted RBP13.3□□□□□ -0.28
PRKN-205ENST00000366897 LRRC8DQ7L1W4 858 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 PLD3Q8IV08 490 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 MICU2Q8IYU8 434 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 NKAPQ8N5F7 415 aaKnown RBP13.3□□□□□ -0.28
PRKN-205ENST00000366897 ATAD1Q8NBU5 361 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 FAM83FQ8NEG4 500 aaPredicted RBP13.3□□□□□ -0.28
PRKN-205ENST00000366897 VMP1Q96GC9 406 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 PSD2Q9BQI7 771 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 ASPSCR1Q9BZE9 553 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 DPY30Q9C005 99 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 C6orf62Q9GZU0 229 aaPredicted RBP13.3□□□□□ -0.28
PRKN-205ENST00000366897 DSN1Q9H410 356 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 EHD1Q9H4M9 534 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 NLE1Q9NVX2 485 aaPredicted RBP13.3□□□□□ -0.28
PRKN-205ENST00000366897 TMED5Q9Y3A6 229 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 ORC6Q9Y5N6 252 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 DOCK4Q8N1I0 1966 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 UPK3BL1B0FP48 263 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 UPK3BL2E5RIL1 263 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 AREL1O15033 823 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 PFDN6O15212 129 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 SLC22A1O15245 554 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 B4GALT3O60512 393 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 SEC22BO75396 215 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 LRATO95237 230 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 SERPINB1P30740 379 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 AKT1P31749 480 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 HTR7P34969 479 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 NEK2P51955 445 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 IL10RBQ08334 325 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 SLC14A1Q13336 389 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 ARHGEF6Q15052 776 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 MBOAT1Q6ZNC8 495 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 CHPFQ8IZ52 775 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 OR8J3Q8NGG0 315 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 CAPSLQ8WWF8 208 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 S100ZQ8WXG8 99 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 LGALS12Q96DT0 336 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 C1orf74Q96LT6 269 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 TRIM62Q9BVG3 475 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 SLIRPQ9GZT3 109 aaKnown RBP13.3□□□□□ -0.28
PRKN-205ENST00000366897 RNF167Q9H6Y7 350 aa13.3□□□□□ -0.28
PRKN-205ENST00000366897 NAALAD2Q9Y3Q0 740 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms