RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 POMT2Q9UKY4 750 aa11.32□□□□□ -0.6
MRPL55-213ENST00000366740 DRG1Q9Y295 367 aaKnown RBP11.32□□□□□ -0.6
MRPL55-213ENST00000366740 MYO7BQ6PIF6 2116 aa11.32□□□□□ -0.6
MRPL55-213ENST00000366740 A6NL46 340 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 USP27XA6NNY8 438 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 PSMD3O43242 534 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 SGTAO43765 313 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 PRAMEF1O95521 474 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 CRTAMO95727 393 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 ITGA9Q13797 1035 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 NCF4Q15080 339 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 LONRF2Q1L5Z9 754 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 VWA5B1Q5TIE3 1220 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 C1QL3Q5VWW1 255 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 FBXO38Q6PIJ6 1188 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 TMEM220Q6QAJ8 160 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 IGFL3Q6UXB1 125 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 RAB43Q86YS6 212 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 SLC35F6Q8N357 371 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 RASGEF1CQ8N431 466 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 PRELID2Q8N945 189 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 OR1L3Q8NH93 324 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 CLIP3Q96DZ5 547 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 DNAJC1Q96KC8 554 aaKnown RBP11.31□□□□□ -0.6
MRPL55-213ENST00000366740 C12orf66Q96MD2 445 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 RANBP9Q96S59 729 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 DPH2Q9BQC3 489 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-213ENST00000366740 WWP1Q9H0M0 922 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 ASB8Q9H765 288 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 SOHLH2Q9NX45 425 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 SMARCAL1Q9NZC9 954 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 FEZ2Q9UHY8 353 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-213ENST00000366740 B3GNT3Q9Y2A9 372 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 JRKLQ9Y4A0 524 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 CFAP20Q9Y6A4 193 aaKnown RBP11.31□□□□□ -0.6
MRPL55-213ENST00000366740 PDZD2O15018 2839 aa11.31□□□□□ -0.6
MRPL55-213ENST00000366740 OTOGQ6ZRI0 2925 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 CCDC78A2IDD5 438 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 KLHL33A6NCF5 533 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 OR6C74A6NCV1 312 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 MGAT4DA6NG13 374 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 MROH6A6NGR9 719 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 MATN2O00339 956 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 SUN1O94901 812 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 PRSS56P0CW18 603 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 PSMA3P25788 255 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 FDFT1P37268 417 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 POU6F1Q14863 301 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 CCDC38Q502W7 563 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 ARMC6Q6NXE6 501 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 TTC27Q6P3X3 843 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 BEND7Q8N7W2 519 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-213ENST00000366740 OR2L2Q8NH16 312 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 COG1Q8WTW3 980 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 INPP5DQ92835 1189 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 CDKN2AIPNLQ96HQ2 116 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 SGSM3Q96HU1 749 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 RMDN2Q96LZ7 410 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 IP6K3Q96PC2 410 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 C19orf43Q9BQ61 176 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 DHRS4Q9BTZ2 278 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 PITPNM3Q9BZ71 974 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 ACTR5Q9H9F9 607 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-213ENST00000366740 RAB6BQ9NRW1 208 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 NLE1Q9NVX2 485 aaPredicted RBP11.3□□□□□ -0.6
MRPL55-213ENST00000366740 ACSL5Q9ULC5 683 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 ZKSCAN5Q9Y2L8 839 aa11.3□□□□□ -0.6
MRPL55-213ENST00000366740 ANKRD17O75179 2603 aaKnown RBP11.3□□□□□ -0.6
MRPL55-213ENST00000366740 NCOA6Q14686 2063 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 HEATR5BQ9P2D3 2071 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 ANKUB1A6NFN9 424 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 SLC9B1P1A6NJY1 282 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 ERI2A8K979 691 aaKnown RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 TMEM150CB9EJG8 249 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 KLF7O75840 302 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 POLR2CP19387 275 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 CYP2A7P20853 494 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 CDH3P22223 829 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 NDUFS1P28331 727 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 PBLDP30039 288 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 MC4RP32245 332 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 HADHAP40939 763 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 ARCN1P48444 511 aaKnown RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 SOX8P57073 446 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 RAPSNQ13702 412 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 MYBPC3Q14896 1274 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 PTCHD3Q3KNS1 767 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 FNBP1LQ5T0N5 605 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 DET1Q7L5Y6 550 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 SNX20Q7Z614 316 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 MRGPREQ86SM8 312 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 LINC00523Q86TU6 105 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 SLC34A3Q8N130 599 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 CISD2Q8N5K1 135 aaKnown RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 LINC00615Q96LM1 132 aaPredicted RBP11.29□□□□□ -0.6
MRPL55-213ENST00000366740 ZNF778Q96MU6 729 aa11.29□□□□□ -0.6
MRPL55-213ENST00000366740 ZNF552Q9H707 407 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms